Gene Information

Name : ETA_34040 (ETA_34040)
Accession : YP_001909310.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Resistance
Product : DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2076
EC number : -
Position : 3799529 - 3799864 bp
Length : 336 bp
Strand : +
Note : silverDB:etchr03390

DNA sequence :
ATGCCTAATACTTATCTCATTCTTGCTATATCAATCTGTGCTGAAACGCTTGCCACAACCATGATGAAAGCGTCAGAAGG
ATTCACCCGACTGATCCCCAGTATTTTTGTTGTGATTGGCTATGCCATTTCATTTTATGGTCTGTCACAGGTTGTTAAAA
CCATGAATATTGGAATTGCCTATGCCATCTGGGCAGGAATGGGGATATTTCTGGTCTCCATTATGTCATTCTTCATCTAT
AAACAGCGACTCGACCTTCCGGCCATTGCAGGAATGCTCTGTATAGCCGCGGGTATTATCATTATTCAGGTGTTTTCAAA
ATCTGTCGCTCACTGA

Protein sequence :
MPNTYLILAISICAETLATTMMKASEGFTRLIPSIFVVIGYAISFYGLSQVVKTMNIGIAYAIWAGMGIFLVSIMSFFIY
KQRLDLPAIAGMLCIAAGIIIIQVFSKSVAH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 6e-17 46
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 2e-16 44
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 2e-16 44
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 2e-16 44
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 2e-16 44
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-16 44
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 2e-16 44
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-16 44
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-16 44
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-16 44
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 2e-16 44
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-16 44
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 2e-16 44
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 2e-16 44
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 2e-16 44
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 2e-16 44
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-16 44
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 2e-16 44
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 2e-16 44
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 2e-16 44
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 2e-16 44
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 2e-13 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump CP004022.1.gene1549. Protein 2e-25 61
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump NC_010410.6003348.p0 Protein 5e-21 57
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump BAC0002 Protein 5e-21 57
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump BAC0377 Protein 5e-27 56
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump BAC0150 Protein 3e-18 52
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump NC_002695.1.913273.p Protein 3e-18 50
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump CP001138.1.gene1489. Protein 4e-19 50
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump BAC0324 Protein 9e-19 45
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump BAC0323 Protein 7e-17 44
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump BAC0322 Protein 7e-20 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump VFG1586 Protein 3e-17 46
ETA_34040 YP_001909310.1 DMT superfamily multiple drug (Quaternary ammonium compounds) efflux pump VFG1587 Protein 6e-14 42