Gene Information

Name : dnaB (ETA_30940)
Accession : YP_001909008.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Unknown
Product : Replicative DNA helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0305
EC number : 3.6.1.-
Position : 3471118 - 3472533 bp
Length : 1416 bp
Strand : -
Note : silverDB:etchr03081

DNA sequence :
ATGGCAGGAAATAAACCCACCAACAAATCCTACGAAAACCGCGAGCCGCGTGACCGTCAGATGGAAGGTCTCAAGCTGCC
TCCGCATTCGCTGGAAGCAGAGCAGTCGGTGTTGGGCGGTTTAATGCTGGATAACGAACGCTGGGATAACGTCTCGGAGC
GCGTAGTGGCGAAGGACTTCTTCAGCCGCCCGCACCGGATGATCTTCGCGGAAATGCAGCGCCTGCTGGAACAGAGTAAA
CCGATCGATCTGATCACCCTGTCCGAATCGATGGAAACCAAAGGTGAACTGAGCCAGGTTGGCGGTTTCGCTTACCTGGC
CGAGCTGTCAAAAAATACGCCAAGTGCGGCCAACATCGGTGCTTATGCGGATATCGTGCGTGAACGTGCGGTCGTGCGTG
AGATGATCGCCGTGGCAAACGAGATCGCCGATGCCGGCTACGATCCGCAGGGGCGCAGCAGCGAAGATCTGCTCGATCTG
GCGGAAACTCGCGTATTCCAGATTGCCGAAACCCGTGCCAATAAAGATGAAGGGCCGAAAAGCGTCGATCAGATCCTCGA
AGCCACTATCGCGCGTATTGAGGTGCTGTACCAGACGCCACAAGATGGCGTTACCGGAGTGGATACCGGCTATCAGGATC
TGAATAAGAAAACCGCCGGTCTGCAGCGTTCGGACCTGATTATTGTCGCCGCCCGTCCGTCGATGGGTAAAACCACTTTC
GCCATGAACCTGTGCGAAAATGCGGCGATGCTTCAGGACAAACCTGTGCTGATCTTCAGCCTGGAGATGCCCGGCGAGCA
GCTGATGATGCGTATGCTGGCGTCGCTGTCGCGCGTCGATCAGACCCGTATCCGTACCGGCCAGCTTGACGACGAGGACT
GGGCGCGTATCTCCAGCACCATGGGTATCCTGCTGGAGAAGAAGAACATGTTTATTGATGACTCTTCCGGCCTGACGCCG
ACCGACGTGCGTTCGCGTGCGCGCCGTGTTTTCCGCGAGCACGGTGGGCTTAGTCTGATTATGATCGACTACCTGCAGCT
GATGCGCGTTCCGGCGCTTTCCGATAATCGTACGCTGGAAATTGCCGAGATCTCGCGCTCGCTCAAGGCGCTGGCGAAAG
AACTCCAGGTGCCGGTGGTGGCGCTGTCGCAGCTTAACCGCTCGCTGGAACAACGTGCCAATAAACGTCCAATTAACTCG
GATCTGCGTGAGTCCGGCTCCATTGAGCAGGATGCTGACCTCATCATGTTTATCTACCGAGACGAGGTTTATGAAGAAAA
CAGTGAACAGAAGGGGGTGGCAGAGATCATCCTCGGTAAGCAGCGTAATGGCCCGATCGGCACCGTGCGCCTGAAATTCA
ACGGCCAGCATTCGCGTTTTGATAATTACGCCGGCCCGCAGTACGACGACGAATAA

Protein sequence :
MAGNKPTNKSYENREPRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVSERVVAKDFFSRPHRMIFAEMQRLLEQSK
PIDLITLSESMETKGELSQVGGFAYLAELSKNTPSAANIGAYADIVRERAVVREMIAVANEIADAGYDPQGRSSEDLLDL
AETRVFQIAETRANKDEGPKSVDQILEATIARIEVLYQTPQDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTF
AMNLCENAAMLQDKPVLIFSLEMPGEQLMMRMLASLSRVDQTRIRTGQLDDEDWARISSTMGILLEKKNMFIDDSSGLTP
TDVRSRARRVFREHGGLSLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRANKRPINS
DLRESGSIEQDADLIMFIYRDEVYEENSEQKGVAEIILGKQRNGPIGTVRLKFNGQHSRFDNYAGPQYDDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2640 YP_002152342.1 DNA helicase Not tested Not named Protein 1e-99 53
api2 CAF28476.1 putative DNA binding protein with DNA-dependent ATPase activity Not tested YAPI Protein 2e-106 53
dnaB2 YP_001402701.1 replicative DNA helicase Not tested YAPI Protein 6e-106 53
dnaB2 YP_001007676.1 putative DNA helicase Not tested YAPI Protein 5e-106 53
unnamed ABR13456.1 replicative DNA helicase Not tested PAGI-5 Protein 7e-101 49
STY4522 NP_458617.1 DNA helicase Not tested SPI-7 Protein 3e-93 49
t4227 NP_807829.1 DNA helicase Not tested SPI-7 Protein 3e-93 49
dnaB CAI36044.1 replicative DNA helicase DnaB Not tested PPHGI-1 Protein 4e-87 48
dnaB1 YP_005176258.1 replicative DNA helicase Not tested ICEPmu1 Protein 9e-79 45