Gene Information

Name : fimC (ETA_28670)
Accession : YP_001908783.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : type I fimbrial chaperone
Function : -
COG functional category : N : Cell motility
COG ID : COG3121
EC number : -
Position : 3194036 - 3194740 bp
Length : 705 bp
Strand : -
Note : silverDB:etchr02855

DNA sequence : 
GTGACAAAGATGAAAATGACCGTAAAAGCCATGATGGCACTGCTGGCACTGTCTACAGCTGTTGCAGGTGCCGGCCGTGC
TGAGGCTGGCGTAGCGCTGGGAGCAACGCGCGTAGTGTATCCGGCCGATCAGAAACAGGTCACCTTAGGCGTCAGCAACA
ACAACGATAAAGATACTTTTCTCATCCAGTCCTGGGTTGAGAATGATGACGGCCAAAAAGAGAGCCGCTTTGTTATGACG
CCTCCGTTGTTTGTCATGCAGGGGAAGAAAGAGAACACGCTGCGGATAATTGACGCCACGAACAAGGCGTTGCCTCAGGA
TAAAGAAAGCCTGTTTTGGGTCAACGTCAAAGCCATCCCGTCACTGGATAAAGCGCATCAAAAAGACAATACGCTGCAGC
TGGCGATAACCAGCCGGATAAAAATGTTCTACCGTCCGGGCAACCTCAGTATGGCCCCCGATCAGGCGCCGTCAAAGCTG
ACGTTCAGACGCAGCAAGAATGCACTGGAACTGCGCAATCCGACCCCCTACTTCCTGACGGTCACCGAACTTAATGCGGG
GACGCGAATACTGCCGAATACCATGGTTCCTCCAATGGGTTCGGTCAGCGTCACGCTGCCGGCCGACGCGGGTAGCGCAA
TAACCTATCGAACAATAAATGATTACGGCGCGCTGACGACGGCGATAAAAGGAACCATGCAGTAA

Protein sequence : 
MTKMKMTVKAMMALLALSTAVAGAGRAEAGVALGATRVVYPADQKQVTLGVSNNNDKDTFLIQSWVENDDGQKESRFVMT
PPLFVMQGKKENTLRIIDATNKALPQDKESLFWVNVKAIPSLDKAHQKDNTLQLAITSRIKMFYRPGNLSMAPDQAPSKL
TFRRSKNALELRNPTPYFLTVTELNAGTRILPNTMVPPMGSVSVTLPADAGSAITYRTINDYGALTTAIKGTMQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fim2C AFH78430.1 putative fimbrial chaperone protein Virulence KpGI-5 Protein 9e-72 72
sfaE CAC16952.2 SfaE protein Virulence PAI III 536 Protein 1e-63 63

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fimC YP_001908783.1 type I fimbrial chaperone VFG0875 Protein 5e-71 70
fimC YP_001908783.1 type I fimbrial chaperone VFG0911 Protein 4e-64 63
fimC YP_001908783.1 type I fimbrial chaperone VFG1644 Protein 6e-64 63
fimC YP_001908783.1 type I fimbrial chaperone VFG0445 Protein 8e-51 49
fimC YP_001908783.1 type I fimbrial chaperone VFG0455 Protein 3e-38 42