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Name : mrfC (ETA_02610) Accession : YP_001906215.1 Strain : Erwinia tasmaniensis Et1/99 Genome accession: NC_010694 Putative virulence/resistance : Virulence Product : MrfC protein Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 312969 - 315590 bp Length : 2622 bp Strand : + Note : silverDB:etchr00260 DNA sequence : ATGGTTATTTTACCTCCATTAGTTGAGCGTTTTTTTCGCCTCAAAATATTGCATCTGAGTGTTTCTCTGGCGTTGGGTAG TGCTCCTTTATATGCCGCAGAGACAATTGAATTCAATATGGATGTGCTGGATGTCAACGACAGAACAAATATCGACCTGA GTCAGTTTTCCCGTGGCGGTTACATCATGCCGGGAACCTACAATATGGTCGTGCACATTAATAAAGACGATATTCCTGAG CAGGCCGTTAATTTCTATCCACCCGACGACGATGTAAAGGACAGTCAGCCTTGTCTTTCACCAGAGCTGATTGCGCTGCT GGGATTAAAACCCGAAGCGATGAAAGGACTCACCTGGTGGCATCAAGGGGCTTGTTTAAATACCGATAGCCTCAAGGGGA TGGAGACTCGTCCGGACCTGGCTACGTCCTCACTCTATTTGAGCATCCCACAGGCCTATCTGGAGTATTCCTCGCCTGAC TGGGATCCTCCGTCGCGTTGGGATGAAGGTATTCCGGGGATCTTATTTGATTATAACCTGAGTGCCCAGGCGCAGCGCCA ACAGCGTACCGGCAACCAGAATTATAGCGTCAGCGGCGCCGGAACGGCGGGGGTTAATATGGGTGCCTGGCGGCTGCGTG CAGACTGGCAGGGTAACCTGGAACAGCAAAACGGCAGCGCGCAGGGCTCATCAAAGAGATTAGACTGGAGCCGCTATTAC GCCTATCGCGCCCTGCCCGCGATACGCTCCAAACTGACGCTGGGCGAGAGTTATCTCGACTCCGGCATGTTTGACAGTTT TCGCTTTACCGGGGCAAGCATAGTATCAGACGACAATATGCTGCCGCCGAACCTGCGCGGTTACGCCCCGGAAGTGGTGG GTATGGCGAAGACCAATGCTAAAGTGATCATCAGCCAGCTGGGAAGGGTGTTGTACGAAACCCAAGTCGCATCCGGACCA TTCCGCATCCAGGATATTAACGATGCCGTATCCGGTGAGCTCAAGGTTCGGGTGGAAGAGCAGGATGGCAGCGTACAGGA ATTTACTGTGAACACGGCCAATATCCCTTACCTGACGAGACCGGGTTCGCTGCGTTTTAAGTTCGCAGCGGGCAGACCGT CTGACTGGGATCATCGCTCAAACGGCCCGCTCTTCGGCACCGGTGAGTTTTCCTGGGGGGTAAGTAACGGCTGGTCACTG TATGGGGGGGCACTGGCAGGTGGCGATTATAATGCGCTGTCGATCGGTATCGGCCGCGATCTGATGGCTTTAGGGGCGTT GTCCTTTGATGCCACCCAGTCGCGGGCAACTCTTCCTTCAGAGAAGGAAACCCTTAGCGGCGGTTCTTACCGGGTCAGTT ACTCTAAGACCTTTGAAGAGATTGACAGTCAGGTGACCTTTGCAGGCTACCGCTTCTCGGAAGAGAACTTTATGAGCATG AGTGAATATCTCGATGCGCGTCATAATGGCAACCGGGTTGGTGGTAGCAAGGAGATGTATACCCTCTCCTTCAGCAAGCA GTTCCGCGATCTTGGCCTGAGTACGTATCTGAACTACAGCCATCAGACCTACTGGGATCGCCCGGCGAACGATCGTTACA ATCTGACGATGTCACGCTACTTCGATATCGGCCGCTTCAAAAATCTGAGCGTGTCGCTATCGGCTTACCGTAATCGCTAC AACGAGACTAATGACGACGGCGTGTATCTGTCGCTGGCGATGCCATGGGGCAGAAGTGGCAACCTGAGTTATACCACCAC GGCGGACAAAAAAGACATTACCCACCGGGTGGGCTATTACGACAGGATTGATGAGAACAACAGCTACCAGATGACGACGG GAGCTTCGCGTAGGGGAGCCAACGTGAGTGGTTACTATAACCACGAGGGAGATTTGGCAAGGATGAGCGCCAACGCCAGC TTCCAGCAGGGAGGCTATAGCGCGGTCGGTTTAACGGCCCAGGGCGGTGCGACCCTGACGGCGGAAGGCGGTGCGCTGCA CCGTGGTGGCATGATGGGGGGCTCACGTATGCTGCTCGATACCGATGGCGTGGCGGGTGTACCGGTGCGCGGCTACGGTC CAACATCAAAGACCAACCTATGGGGTAAGGCCGTTGTCGCGGACGTCAATAGCTACTACCGCAATAAGGCCAGCATCGAC CTGAACAAGCTTGGCGATAAGGTTGAGGCTACCCGGTCGGTGGTACAGGCCACCCTGACCGAAGGAGCAATTGGTTACCG TAAGTTTGAGGTGATCGCCGGTGAAAAAGCGATGGCCATCATTAAGCTGGCTGACGGCAGTACGCCACCTTTTGGTGCCT CGGTAAGAAATCGCCGTGAGCAGGATACAGGGATCGTTAATGACGGTGGTGTTGTGTACCTCAGCGGAATTAACGCCGGC GATCGTATGACGGTACATTGGGATGGCAAGGCGCAGTGTGAAGTGCAGCTGCCTGCTCCGTTGAAGATTGACCTGACGAA TAACCTGTTGTTGCCTTGTCAGCCGATGGCAACGGTTAGCCGTGGCTCCGCTAGCGGTAACCCGGACAAGATTGAAGCAA CTAAGCCGACGAACAATATTACAACGCCGGAGTCTGGCCCGATCGGCTCCATGAAAAAGTGA Protein sequence : MVILPPLVERFFRLKILHLSVSLALGSAPLYAAETIEFNMDVLDVNDRTNIDLSQFSRGGYIMPGTYNMVVHINKDDIPE QAVNFYPPDDDVKDSQPCLSPELIALLGLKPEAMKGLTWWHQGACLNTDSLKGMETRPDLATSSLYLSIPQAYLEYSSPD WDPPSRWDEGIPGILFDYNLSAQAQRQQRTGNQNYSVSGAGTAGVNMGAWRLRADWQGNLEQQNGSAQGSSKRLDWSRYY AYRALPAIRSKLTLGESYLDSGMFDSFRFTGASIVSDDNMLPPNLRGYAPEVVGMAKTNAKVIISQLGRVLYETQVASGP FRIQDINDAVSGELKVRVEEQDGSVQEFTVNTANIPYLTRPGSLRFKFAAGRPSDWDHRSNGPLFGTGEFSWGVSNGWSL YGGALAGGDYNALSIGIGRDLMALGALSFDATQSRATLPSEKETLSGGSYRVSYSKTFEEIDSQVTFAGYRFSEENFMSM SEYLDARHNGNRVGGSKEMYTLSFSKQFRDLGLSTYLNYSHQTYWDRPANDRYNLTMSRYFDIGRFKNLSVSLSAYRNRY NETNDDGVYLSLAMPWGRSGNLSYTTTADKKDITHRVGYYDRIDENNSYQMTTGASRRGANVSGYYNHEGDLARMSANAS FQQGGYSAVGLTAQGGATLTAEGGALHRGGMMGGSRMLLDTDGVAGVPVRGYGPTSKTNLWGKAVVADVNSYYRNKASID LNKLGDKVEATRSVVQATLTEGAIGYRKFEVIAGEKAMAIIKLADGSTPPFGASVRNRREQDTGIVNDGGVVYLSGINAG DRMTVHWDGKAQCEVQLPAPLKIDLTNNLLLPCQPMATVSRGSASGNPDKIEATKPTNNITTPESGPIGSMKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 50 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 4e-170 | 47 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 8e-169 | 47 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 6e-169 | 47 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 4e-170 | 47 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 5e-170 | 47 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 5e-170 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| mrfC | YP_001906215.1 | MrfC protein | VFG1548 | Protein | 2e-170 | 47 |
| mrfC | YP_001906215.1 | MrfC protein | VFG0884 | Protein | 2e-170 | 47 |
| mrfC | YP_001906215.1 | MrfC protein | VFG0895 | Protein | 2e-170 | 47 |
