Gene Information

Name : xerD (ETA_27870)
Accession : YP_001908704.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3113771 - 3114664 bp
Length : 894 bp
Strand : -
Note : silverDB:etchr02775

DNA sequence :
GTGCAGGATAACGATCTGATTGAGCAATTCCTTGATGCCCTGTGGATAGAGCGCAATCTGGCGCAAAATACCGTGGCTTC
TTATCGCCTCGATCTGCGCTCGCTCTGTGACTGGCTGGCCTGTCAGCCGCTGTCGTTGCTGAATGCGCAAGCGATCGACC
TCCGGGCGTTTCTGGCGCAGCGCCTGGAAGGCGGCTACAAGGCGAGCAGCTCTGCCCGTTTGCTTAGCGCCATGCGGCGT
CTGTTCCAGTATCTTTACCGGGAAAAGCTGCGTGAAGACGATCCCAGCGCGCTGCTTTCCTCGCCTAAACTGCCGCAGCG
CCTGCCGAAAGATCTGTCAGAGGCCCAGGTAGAAAGATTATTACAGTCGCCATGCCTGGAACAGCCGATTGAGCTGCGCG
ATAAGGCAATGCTGGAGCTGCTGTACGCCACGGGGCTGCGCGTCACTGAACTGGTCGGGCTGACCCTGAGTGATATCAGC
CTGCGTCAGGGCGTGGTAAGGGTGTTGGGGAAAGGGAATAAAGAACGTCTGGTGCCAATGGGGGAAGAGGCGGTGCACTG
GATAGAGCAGTTTATTGAGTACGGCCGCCCGTGGCTGCTCAACGGGCAGACGCTTGACGTGCTGTTCCCCAGTAACCGTG
CGAAACAAATGACGCGTCAAACCTTCTGGCATCGCATTAAACATTACGCCACACTGGCGGGCATCGACAGCGACAAACTG
TCACCCCACGTTCTGCGCCATGCTTTTGCAACCCATTTGCTGAACCACGGGGCAGATTTACGTGTCGTACAGATGTTGTT
AGGTCACAGCGATTTATCGACGACACAGATTTATACACATGTAGCGACAGAGCGCCTGCGGCAGCTGCATCAGCAGCATC
ATCCGCGCGCCTGA

Protein sequence :
MQDNDLIEQFLDALWIERNLAQNTVASYRLDLRSLCDWLACQPLSLLNAQAIDLRAFLAQRLEGGYKASSSARLLSAMRR
LFQYLYREKLREDDPSALLSSPKLPQRLPKDLSEAQVERLLQSPCLEQPIELRDKAMLELLYATGLRVTELVGLTLSDIS
LRQGVVRVLGKGNKERLVPMGEEAVHWIEQFIEYGRPWLLNGQTLDVLFPSNRAKQMTRQTFWHRIKHYATLAGIDSDKL
SPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 1e-54 58
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 1e-54 58