Gene Information

Name : ETA_26920 (ETA_26920)
Accession : YP_001908610.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Unknown
Product : IS3 family transposase OrfB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2995313 - 2996164 bp
Length : 852 bp
Strand : +
Note : silverDB:etchr02680

DNA sequence :
ATGTCGTCCTTTTATGCTGTACGCCGGTTGTGTCTGGTTCTTGGCCTCCATTACAGCGGTTATTACCAGTGGCTAAAGCG
ACCTCAATCTTTGCGTGCCAGGCAAGATGATCGCCAAACAGGTCTCATTAAGCAACTGTGGCTTGAAAGTGGTACGGTTT
ATGGTTATCGAAAAATCTGGCTCGATATGAAAGACTTGGGTGAACGAGCCGGGCGTAACAGGATCGCGCGCCTAATGAGG
CTTGCAGAGTTGGCTTCTCAAACCGGATACCGGAAACGACGCTATTGCGGCGGCGGAAAGCCTTCAGTTGCCAGCCCTAA
TTACCTTGAACGCCAGTTCATTGTTCCTACCCCAAATACTCATTGGGTGAGTGACATGACCTATATAAGAACGCATGAGG
GTTGGTTGTATCTGGCCGTTGTTCTCGACCTCTTCTCGCGCCGGGTTATCGGCTGGAGTATGGGGGGACGAATGACAGCA
GAGTTGGTGATGGACGCCTTGTTGATGGCGGTGTGGCGACGCAAACCAGCGGCAGAAGTACTAATCCATTCGGATCAGGG
GTCTCAATATACGAGCGAAAGATGTCAGCACTTTATGACAGCTCACAATTTAAAAAGCAGCATGAGTCGTCGTGGTAATT
GCCATGATAACGCGGTGGCAGAAAGCTTTTTCCAGTTGCTAAAACGAGAACGCATAAAGAAACGGATCTATAAAAATAGA
GAAGAAGCAAAGGCTGATATCTTCGATTATGTAGAGATGTTTTATAATGCTAAACGTCGGCATAGCGCCTGTGAAGATCA
ACCCCCTGCAGTTTATGAAAGTGCCTGGTTCATGAGGCACGGAACCGTCTAG

Protein sequence :
MSSFYAVRRLCLVLGLHYSGYYQWLKRPQSLRARQDDRQTGLIKQLWLESGTVYGYRKIWLDMKDLGERAGRNRIARLMR
LAELASQTGYRKRRYCGGGKPSVASPNYLERQFIVPTPNTHWVSDMTYIRTHEGWLYLAVVLDLFSRRVIGWSMGGRMTA
ELVMDALLMAVWRRKPAAEVLIHSDQGSQYTSERCQHFMTAHNLKSSMSRRGNCHDNAVAESFFQLLKRERIKKRIYKNR
EEAKADIFDYVEMFYNAKRRHSACEDQPPAVYESAWFMRHGTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpB CAB61574.1 transposase B Not tested HPI Protein 2e-38 43
trp1329B CAB46576.1 IS1329 transposase B Not tested HPI Protein 2e-38 43
Z5089 NP_290241.1 transposase Not tested LEE Protein 9e-30 42
unnamed ACU09432.1 IS911 transposase orfB Not tested LEE Protein 7e-30 42
unnamed CAI43898.1 putative transposase Not tested LEE Protein 2e-30 42
aec65 AAW51748.1 Aec65 Not tested AGI-3 Protein 2e-30 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETA_26920 YP_001908610.1 IS3 family transposase OrfB VFG0785 Protein 4e-30 42