Gene Information

Name : spaR2 (ETA_26850)
Accession : YP_001908605.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : Surface presentation of antigens protein (Spa29 protein), type III secretion apparatus
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 2990864 - 2991628 bp
Length : 765 bp
Strand : -
Note : silverDB:etchr02673

DNA sequence : 
ATGCTGTCAGTTGCCCTTTACTTAAATTTCCAGCACGGCGTACCGATCTTCGCGATGGCTTATGCGAGGGTGGCAATTGT
ATTTTATTTGCTGCCCGTGCTGGGAGAGCGGGTCTTGGCTAATTTAATTGTTAAGAACACGATTATTGGGCTGGTCATAC
TCGGTTTATGGCCCTGTTTCGGTCAGGTGCTTAATCCGGAACAGGGGTGGTTTATCTTACTTGTGAAGGAATGCGTCATA
GGATTAATTCTGGCTATGACGTTATGTGTTCCTTTCTGGATTGTCATTAATCTTGGGGAAATACTCGATAACCAACGAGG
CGCAACCCTAAGTGACAGTATTGATCCAGTGAATGGCGTGCAAAGCTCGACATTATCGGGTTTTCTAAATTTTGCTTTCG
GCGCAATTTTTTTTGCAAGTGGCGGCATGAGTTCCCTTATGGAAGTATTGGTGCAGAGCTATCAGGTTTTTCCAACGGGA
GACAACCTGGTCGACTTCCGTTGGGAAGCGGCAGGGCATTTATTGATGGTGCTCGCAGAGGGCAGCATCATGCTGGCAGC
TCCGGTAATGATAGTCATGATGGTGGCGGAAATATTACTGGGTGTTTTTGCACGCTTTTGTCCCCAGTTGAACCCTTTCT
CCCTCTCTTTGACGATAAAAAGTTTTATTGCCTTCATTGTCTTTCTTTTTTACGGTTTTAAGGCTATTTCGCAAAAACCC
TTACAGCTTTTCTCTGTTACGTTTTTTCAGCAATTTTTCCCCTGA

Protein sequence : 
MLSVALYLNFQHGVPIFAMAYARVAIVFYLLPVLGERVLANLIVKNTIIGLVILGLWPCFGQVLNPEQGWFILLVKECVI
GLILAMTLCVPFWIVINLGEILDNQRGATLSDSIDPVNGVQSSTLSGFLNFAFGAIFFASGGMSSLMEVLVQSYQVFPTG
DNLVDFRWEAAGHLLMVLAEGSIMLAAPVMIVMMVAEILLGVFARFCPQLNPFSLSLTIKSFIAFIVFLFYGFKAISQKP
LQLFSVTFFQQFFP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaT AAS66848.1 YsaT Not tested SSR-1 Protein 3e-60 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaR2 YP_001908605.1 Surface presentation of antigens protein (Spa29 protein), type III secretion apparatus VFG2453 Protein 1e-41 47
spaR2 YP_001908605.1 Surface presentation of antigens protein (Spa29 protein), type III secretion apparatus VFG1771 Protein 3e-33 44
spaR2 YP_001908605.1 Surface presentation of antigens protein (Spa29 protein), type III secretion apparatus VFG1014 Protein 2e-24 42