Gene Information

Name : sicA2 (ETA_26830)
Accession : YP_001908603.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : type III secretion chaperone
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2989072 - 2989599 bp
Length : 528 bp
Strand : -
Note : silverDB:etchr02671

DNA sequence : 
ATGAATACTGTTGATGATATGCTCAACGATGAAGAAGATTTGACCAGTGACAGTCAACTGGAGGAATACTCGGGTGCCCT
GCTTGATGCTATTCAGAGTGGTGCCATACTAAAAGACCTGCATCAGGTTTCCAATGAGACCATGGATGATGTTTACAAGT
TGGCTCATGATTTTTATATCAATGGCAAGTTGAAGGATGCCGAATCGCTTTTTCGCTTCTTGTGCATCTACGATTTTTAC
AACCCAGAATATGCGATGGGCTTAGCTGCCGTACATCAGCTGAAGAAAAACTATACCAAGGCGATCGACTTTTACGCCCT
GGCTTACTCATTGTCTACCGATGATTATCGGCCGATGTTTTATGCCGGCCAGTGCAATTTAATGCTGCGTCGAGCCGTGC
AGGCTAGAAAATGTTTTGAAATTGTAGCTAGTAGCTGCAAGGAGCCGCAGCTAAAAGAAAAAGCCAGGAATTATCTGTCG
GCGTTAGACGAGGTCGATAACGGTGGGGCAGATAGTTCTGTTGAATAA

Protein sequence : 
MNTVDDMLNDEEDLTSDSQLEEYSGALLDAIQSGAILKDLHQVSNETMDDVYKLAHDFYINGKLKDAESLFRFLCIYDFY
NPEYAMGLAAVHQLKKNYTKAIDFYALAYSLSTDDYRPMFYAGQCNLMLRRAVQARKCFEIVASSCKEPQLKEKARNYLS
ALDEVDNGGADSSVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaT NP_806489.1 hypothetical protein Virulence SPI-1 Protein 8e-38 50
sicA NP_461807.1 secretion chaperone Virulence SPI-1 Protein 8e-38 50
sicA YP_217805.1 surface presentation of antigens; secretory proteins Virulence SPI-1 Protein 8e-38 50
spaT NP_457280.1 unknown function Virulence SPI-1 Protein 8e-38 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sicA2 YP_001908603.1 type III secretion chaperone VFG2451 Protein 9e-45 55
sicA2 YP_001908603.1 type III secretion chaperone VFG1769 Protein 4e-35 54
sicA2 YP_001908603.1 type III secretion chaperone VFG0547 Protein 2e-38 50
sicA2 YP_001908603.1 type III secretion chaperone VFG0988 Protein 7e-37 46