Gene Information

Name : ribD (ETA_25320)
Accession : YP_001908454.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 2835473 - 2836576 bp
Length : 1104 bp
Strand : -
Note : silverDB:etchr02520

DNA sequence :
ATGCGCGATGAAGTTTATATGGCCCGGGCGCTGGAACTGGCGCGCCGTGGCCGATTTACCACCACGCCGAATCCCAATGT
AGGATGCGTGCTGGTACGTGATGACCAGATCGTGGGAGAAGGCTATCATCTGCGTGCCGGTGAGCCGCACGCGGAAGTTC
ACGCGCTGCGTATGGCGGGTGAAAAATCGCGTGGCGCTACCGTCTATGTGACGCTGGAGCCGTGTAGCCATCATGGCCGT
ACGCCGCCGTGCTGCGATGCGCTGATTGCGGCTGGCGTTAAGCGGGTTGTTACCGCGATGCAGGACCCGAATCCGCAGGT
GGCAGGTCGTGGCCTGTATCGTCTGCAGCAGGCGGGCATCGAGGTCAGCCACGGGCTGATGATGCAGGAAGCGGAAGCGT
TAAACCGTGGGTTTCTCAAACGTATGCGCACCGGCTTCCCTTGGGTGCAGCTTAAACTTGGCGCCTCGCTGGATGGGCGC
ACGGCGATGGCCAGTGGGGAAAGTCAGTGGATAACGTCCCCCGAAGCAAGACGCGATGTGCAAAGACTGCGCGCGCAAAG
CTCGGCTATTCTCAGCACCAGCGGCACCGTGCTGGCCGATAATCCGGCGCTCACCGTCCGTCATGATGAACTGGATAGCG
CCAGCCTGGCGGACTACCCGGTCAACCTACTGCGCCAGCCGATACGCGTTATCGTTGACGGACAGAACCGCATTACCCCA
CAGCATCGGCTTATTGCCCAGCCGGGCGAAACCTGGCTGGCGCGCACCTCCAGCTGTCCGCAGCAGTGGCCGGAAAACGT
CAGTCAGCTGATCGTACCACGCCATCAGGATCGCCTCGATCTGGTCTCGATGCTGATGCTGCTGGGCAAAAAACAGATTA
ACAGCCTGTGGGTGGAGGCCGGAGCGCAATTTGCCGGTGCATTACTCCAGGCAGGCGTTGTCGATGAGCTGATCGTCTAC
ATGGCTCCTAAACTACTTGGCGATGCCGGGCGCGCCCTGTGCCAGCTGCCGGGACTGGAAACGCTGGCCGCCGCACCGGC
GTTTACCTTTAGTGATATTCGTCAGGTGGGGCCTGATCTCAGGCTCACGTTGACCCCGTTATGA

Protein sequence :
MRDEVYMARALELARRGRFTTTPNPNVGCVLVRDDQIVGEGYHLRAGEPHAEVHALRMAGEKSRGATVYVTLEPCSHHGR
TPPCCDALIAAGVKRVVTAMQDPNPQVAGRGLYRLQQAGIEVSHGLMMQEAEALNRGFLKRMRTGFPWVQLKLGASLDGR
TAMASGESQWITSPEARRDVQRLRAQSSAILSTSGTVLADNPALTVRHDELDSASLADYPVNLLRQPIRVIVDGQNRITP
QHRLIAQPGETWLARTSSCPQQWPENVSQLIVPRHQDRLDLVSMLMLLGKKQINSLWVEAGAQFAGALLQAGVVDELIVY
MAPKLLGDAGRALCQLPGLETLAAAPAFTFSDIRQVGPDLRLTLTPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-60 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-60 47