Gene Information

Name : int (ETA_24330)
Accession : YP_001908356.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Unknown
Product : Prophage integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0582
EC number : -
Position : 2740198 - 2741412 bp
Length : 1215 bp
Strand : -
Note : silverDB:etchr02421

DNA sequence : 
ATGAAGCTAAACGCCCGCCAGGTGGACACCGCCAGAGGCAAGGACAAGCCCTATAAGCTGGCAGACGGCGGCGGCCTGTA
CCTGTTGGTTAATCCCAATGGTGCAAGATACTGGCGCTTAAAGTACCGTGCCGCAGGAAAAGAAAAGCTGTTAGCGGTGG
GGGTATATCCTGATGTGTCACTGTCCGATGCCAGAAGGCGGCGCGATGAGGCAAAAAAGATACTGGCGGCGGGTGGCGAT
CCGGGGCAGGAAAAGCAGGCAGAGAAACAGTCCAAAATATTAGCCGTACAAAACAGCTTTGAAGCTATCGCGCTTGAGTG
GCACGAGCACAAAAAAACAAACTGGTCAGAAGGCTATGCTACCGACATACTGGAATATCTTAGTAAGGATATTTTTCCGT
TTGTCGGTAAACGGGCTATCAATGAGATTAAACCCGCCGAAATGCTGGCAGTGTTGCGTAAAATGGAGCAGCGCGGCGTG
CTGGATAAGCTGAAAAAGACCCGGCAGGCTTGCAGGCAGATTTTTACCCATGCGGTGATAACGGGCAGGGCAGAGAATAA
CCCGGTCACCGATCTGGCTGGCGCACTGAAAGCACCCAAGCAAAAACATTTCCCACACCTGAATGTTGACCAGATACCCC
CATTCCTTAATGACCTGAGCAATTACAGTGGCAGTATGATCACCCGCTACGCTACCCAGCTACTGATGATTACCGGGTTA
AGGACTATCGAACTCCGCGCCTCTGAATGGTCAGATATCGATTTTGATAAGGGTATCTGGCAGATCCCCGCCGAACGTAT
GAAGATGCGCCGCCCCCACATAGTACCCATTTCCAGCCAGGCTAAATCGTTACTTGAAGCAATCCACCAGCTAACCGGAC
GGGGTAAGTACGTTTTCCCCGGTCGTAATGATGCGGGTAAGCCAATGAGTGAGGCCAGTATCAATCAGGTCATTAAACGT
ATTGGCTATGACGGCAAGGCCACCGGGCATGGGTTCCGTCACACGATGAGCACAATCCTACATGAGCAGGGTTATAACTC
CGCATGGGTTGAAACCCAGTTAGCTCACGTCGATAAGAACAGTATTAGAGGAACGTATAACCACGCGCAGTACCTGGACG
GAAGACGGGAAATGCTCCAATGGTATGCCGATTATATGGACGCGCTGGAAAGCGGGGATAATGTGGTACATGGTGCGTTC
GGAAAGCTCGCATAG

Protein sequence : 
MKLNARQVDTARGKDKPYKLADGGGLYLLVNPNGARYWRLKYRAAGKEKLLAVGVYPDVSLSDARRRRDEAKKILAAGGD
PGQEKQAEKQSKILAVQNSFEAIALEWHEHKKTNWSEGYATDILEYLSKDIFPFVGKRAINEIKPAEMLAVLRKMEQRGV
LDKLKKTRQACRQIFTHAVITGRAENNPVTDLAGALKAPKQKHFPHLNVDQIPPFLNDLSNYSGSMITRYATQLLMITGL
RTIELRASEWSDIDFDKGIWQIPAERMKMRRPHIVPISSQAKSLLEAIHQLTGRGKYVFPGRNDAGKPMSEASINQVIKR
IGYDGKATGHGFRHTMSTILHEQGYNSAWVETQLAHVDKNSIRGTYNHAQYLDGRREMLQWYADYMDALESGDNVVHGAF
GKLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AFX83955.1 integrase Not tested SE-PAI Protein 1e-132 64
int CAC39282.1 integrase Not tested LPA Protein 9e-126 61
aec33 AAW51716.1 Int Not tested AGI-3 Protein 5e-126 61
ESA_03025 YP_001439090.1 hypothetical protein Not tested Not named Protein 1e-121 61
int AAC31482.1 CP4-like integrase Not tested LEE Protein 2e-125 61
int ACU09430.1 integrase Not tested LEE Protein 2e-125 61
intL NP_290239.1 integrase for prophage 933L and the LEE pathogenicity island Not tested LEE Protein 3e-125 61
ECs4534 NP_312561.1 integrase Not tested LEE Protein 3e-125 61
int AAD54663.1 Sai integrase Not tested SHI-2 Protein 3e-124 61
S4835 NP_839238.1 integrase Not tested SHI-2 Protein 3e-124 61
SF3698 NP_709437.1 integrase Not tested SHI-2 Protein 3e-124 61
int AAD44730.1 Int Not tested SHI-2 Protein 4e-124 60
STY4821 NP_458899.1 integrase Not tested SPI-10 Protein 3e-76 43
intB CAD42017.1 bacteriophage P4 integrase Not tested PAI II 536 Protein 6e-69 41
SESS1296_03598 AFO66301.1 bacteriophage integrase Not tested SESS LEE Protein 1e-74 41
SESS1635_03816 AFO66367.1 bacteriophage integrase Not tested SESS LEE Protein 1e-74 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
int YP_001908356.1 Prophage integrase VFG0783 Protein 1e-125 61
int YP_001908356.1 Prophage integrase VFG0598 Protein 1e-124 61
int YP_001908356.1 Prophage integrase VFG1536 Protein 3e-69 41