Gene Information

Name : ETA_23190 (ETA_23190)
Accession : YP_001908243.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : pathogenicity island protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3272
EC number : -
Position : 2620316 - 2621272 bp
Length : 957 bp
Strand : -
Note : silverDB:etchr02307

DNA sequence : 
ATGGATAAAAAAATTCCGGTTGGTATCAGCGCCTGTCTGCTGGGCGAGCGCGTGCGCTTTGACGGTGGACATAAACGCAG
TGAATTTGCCGCACAGCAGCTGGCCCCTTTTCTTCGTTACGAGCCCGTATGCCCGGAGATGGCGATCGGACTGCCCACTC
CGCGCCCCGCGCTGCGCTTGACCGAAGCGGCGCAGGGCGAGATATCGCTCTGTTTCAGCAACGGCAACGATCTGCCCGTC
ACGGAAAAGATGCAGGCGTTCTCAGAACAAAAAGTGAGCCAATTACATCATCTCTGCGGCTATATTGTCTGCGCTAAATC
CCCCAGCTGTGGCATGGAAAGGGTGCGTATCTATCAGCCTGACAACAATAATAATCGCAAGGCCGGAACCGGAGTATTTA
CCCGCGAACTGATGGAGAAAATGCCGTGGCTACCGGTGGAAGAGGATGGCCGCCTCCACGACCCGCTGCTGCGTGAGAAT
TTTGTCGCACGTGTTTATGCCCTGCACGAGTTCAATCAGCTGTGGCGCGCCGGGCTGACGCGCGCCAAACTCATGGCGTT
CCATACCCAATACAAACTGCTGCTGCTGGCCCACTCTCAGCCTGCTTATCGCCAGATCGGGCCTTTCGTTGCCAAAATGG
ACCAGTGGGCGTCGCTTGAGGCGTTTGCCCACGAGTACCGGCAGCGGCTGATGGATCTGATGCAGCAGCCGGCAACGCGC
ACTAACCACACGAACGTGCTGATGCATGTTCAGGGCTACTTTCGCCGTGAGCTGACTTCCGCACAGCGTCAGGAACTGGC
AGGCGTGATAGACGACTATCGTCAGGGGCTGCTGCCGCTGCTGGCGCCGATAACCCTGCTGAAACACTATATGACGGAAT
TCCCACACCCGTGGCTGGCCGGGCAGCGCTATTTCGCGCCTTACCCGGAAGCGCTGCGCCTGCGCTACGGACATTAA

Protein sequence : 
MDKKIPVGISACLLGERVRFDGGHKRSEFAAQQLAPFLRYEPVCPEMAIGLPTPRPALRLTEAAQGEISLCFSNGNDLPV
TEKMQAFSEQKVSQLHHLCGYIVCAKSPSCGMERVRIYQPDNNNNRKAGTGVFTRELMEKMPWLPVEEDGRLHDPLLREN
FVARVYALHEFNQLWRAGLTRAKLMAFHTQYKLLLLAHSQPAYRQIGPFVAKMDQWASLEAFAHEYRQRLMDLMQQPATR
TNHTNVLMHVQGYFRRELTSAQRQELAGVIDDYRQGLLPLLAPITLLKHYMTEFPHPWLAGQRYFAPYPEALRLRYGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 1e-92 59
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 1e-92 59
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 8e-93 59
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 7e-93 59
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 1e-92 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETA_23190 YP_001908243.1 pathogenicity island protein VFG0490 Protein 4e-93 59