Gene Information

Name : prgI (ETA_19110)
Accession : YP_001907844.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : type III secretion apparatus
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2167618 - 2167824 bp
Length : 207 bp
Strand : +
Note : silverDB:etchr01900

DNA sequence :
ATGTCGTCGGCATTCGAGTCAGGTGCAAAAAACATGATGTCAGAACTCCAATCAGCATTGGAAAAGCTGGAGGCCGACCC
TTCCAATCCATCAGTACTGGCTAATTATCAGGCAAAGCTGCAGGAATATACACTCTTTCGAAGTGCTCAAAGCAGTACTA
TTAAAGCTTACAGCAGTATATGTAAAGATATTATCCAGAAATTCTGA

Protein sequence :
MSSAFESGAKNMMSELQSALEKLEADPSNPSVLANYQAKLQEYTLFRSAQSSTIKAYSSICKDIIQKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaG AAS66835.1 YsaG Not tested SSR-1 Protein 5e-15 53
prgI NP_457267.1 pathogenicity 1 island effector protein Virulence SPI-1 Protein 2e-13 48
prgI NP_806476.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 2e-13 48
prgI YP_217792.1 cell invasion protein Virulence SPI-1 Protein 1e-13 48
prgI NP_461794.1 needle complex major subunit Virulence SPI-1 Protein 1e-13 48
prgI AAX49613.1 PrgI Virulence SPI-1 Protein 9e-14 48
ECs3718 NP_311745.1 EprI Not tested LIM Protein 4e-12 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
prgI YP_001907844.1 type III secretion apparatus VFG0996 Protein 7e-14 49
prgI YP_001907844.1 type III secretion apparatus VFG0535 Protein 4e-14 48
prgI YP_001907844.1 type III secretion apparatus VFG2466 Protein 1e-10 42