|
Name : spaP (ETA_19000) Accession : YP_001907833.1 Strain : Erwinia tasmaniensis Et1/99 Genome accession: NC_010694 Putative virulence/resistance : Virulence Product : surface presentation of antigens protein SpaP Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4790 EC number : - Position : 2155428 - 2156099 bp Length : 672 bp Strand : - Note : part of a type III secretory system probably involved in invasion into eukaryotic cells DNA sequence : ATGTTGAACAATGAAATTTCATTAATTGCACTGCTCTCTTTTTTCACCTTACTGCCATTCATCATAGCAGGAGGGACTTG TTTTATAAAGTTCTCGATTGTCCTGGTTATGATGCGCAATGCACTAGGTATACAGCAGGTACCCTCAAATCTGACACTCA ATGGTGTCGCGCTTGTACTTACTGCTTTTGTCATGATGCCGGTTTGCCAGCGCATTTCTGGCTATATAGAAGCCAAAAGT TTAGACTTTAACGAAAGAGGGGCACTTTCCCAGTTGATGAATGAAGGGATAGAAAGCTATCGAGAATATCTGGTGCGTTA TTCTGATCATAATCTGATTCTATTTTTCAATAATGTTGAACACAGAAATGAAGTTACGCTCGAAGACCGGGTGCCTGATG AAGAACTAAGCCAGTTGTCCTTACTGACCTTGATGCCAGCATATGCACTAAGCGAAATACAGAGCGCCTTCAGAATTGCT TTTTACCTGTATATTCCCTTTGTTGTCATAGACCTGGTGGTATCCAGTATTTTACTGGCATTAGGAATGATGATGATGAG TCCTGTTACTATTTCAATTCCAATTAAATTAATCCTCTTTGTCGCAATGGACGGTTGGGCCTTATTGGCTAAGGGGCTGA TCACTCAATATCTCGATCTGATGACCTCATGA Protein sequence : MLNNEISLIALLSFFTLLPFIIAGGTCFIKFSIVLVMMRNALGIQQVPSNLTLNGVALVLTAFVMMPVCQRISGYIEAKS LDFNERGALSQLMNEGIESYREYLVRYSDHNLILFFNNVEHRNEVTLEDRVPDEELSQLSLLTLMPAYALSEIQSAFRIA FYLYIPFVVIDLVVSSILLALGMMMMSPVTISIPIKLILFVAMDGWALLAKGLITQYLDLMTS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ysaR | AAS66846.1 | YsaR | Not tested | SSR-1 | Protein | 1e-64 | 69 |
| spaP | YP_217809.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 5e-58 | 61 |
| spaP | NP_461811.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 5e-58 | 61 |
| spaP | NP_457284.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 1e-57 | 60 |
| spaP | NP_806493.1 | surface presentation of antigens protein SpaP | Virulence | SPI-1 | Protein | 1e-57 | 60 |
| spaP | NP_311752.1 | surface presentation of antigens protein SpaP | Not tested | LIM | Protein | 1e-56 | 60 |
| epaP | AAZ31293.1 | EpaP | Virulence | ETT2 | Protein | 4e-55 | 58 |
| spaP | AAS66865.1 | SpaP | Not tested | SSR-2 | Protein | 5e-51 | 52 |
| YPO0270 | YP_002345352.1 | type III secretion system protein | Virulence | Not named | Protein | 3e-34 | 44 |
| unnamed | AAL06354.1 | EscR | Virulence | LEE | Protein | 1e-32 | 43 |
| escR | AFO66317.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-32 | 41 |
| escR | AFO66400.1 | putative LEE-encoded type III secretion system factor | Virulence | SESS LEE | Protein | 5e-32 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaP | YP_001907833.1 | surface presentation of antigens protein SpaP | VFG0551 | Protein | 2e-58 | 61 |
| spaP | YP_001907833.1 | surface presentation of antigens protein SpaP | VFG2455 | Protein | 5e-54 | 57 |
| spaP | YP_001907833.1 | surface presentation of antigens protein SpaP | VFG1773 | Protein | 9e-57 | 56 |
| spaP | YP_001907833.1 | surface presentation of antigens protein SpaP | VFG1012 | Protein | 8e-50 | 55 |
| spaP | YP_001907833.1 | surface presentation of antigens protein SpaP | VFG0394 | Protein | 3e-30 | 42 |
| spaP | YP_001907833.1 | surface presentation of antigens protein SpaP | VFG0044 | Protein | 2e-31 | 42 |
