Gene Information

Name : spaR1 (ETA_18990)
Accession : YP_001907832.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : type III secretion apparatus
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 2154393 - 2155121 bp
Length : 729 bp
Strand : -
Note : silverDB:etchr01888

DNA sequence : 
ATGATATATGTCGTTGCTTATGCTCGTCTGGCAATCGTTTTCTATTTGCTTCCGATACTGGGCGACCGGATTTTATCCAA
CCTGATAGTTAAAAACTCAATCATATCACTCGTTATCATTGGTCTATGGCCCTGCTATGAACCTGATATCGTCACTGAAC
GGGGATTGATATCTGTATTGGTCGAAGAATGTTTCATGGGCTTGCTTCTCGCAACTGTTTTATGCATTCCTTTCTGGATC
GTTATTGCGCTTGGTGACATTCTGGATAACCAACGTGGGGCGACCATAAACGATATTTTCGATCCATTGAGTGGCGGACA
AAACTCCGTTTTATCTGCTTTTTTCAATTTTTCTTTTGGTATGATATTTTTTTCAAGTAATGGAATGCTGTTACTAATGA
ATGCATTGATGAAAAGCTATCAGTATTTACCTCAGGGTCATGATATCTCAGGAGTTAATTGGTCGAAAGCTGGGAAATTA
TTGGTTGAATTGGTTGAGTGTAGCATCATGCTGGCAGCGCCGGTTATCATAGTGTTGCTGGTCACGGAAATATTGCTCGG
AGTTTTTGCCCGATATTGCCCACAGCTGAACGCATTCTCGTTGTCACTCACTTTAAAGAGTTTCATTACATTTATCATCT
TTTTGTTATACGGGTTAAATGCTTTAGCTGACGAGCCGCTTAAATATTTCTCGATCAATTCCCTATATGTTTTTTTTCCA
AGTGGGTGA

Protein sequence : 
MIYVVAYARLAIVFYLLPILGDRILSNLIVKNSIISLVIIGLWPCYEPDIVTERGLISVLVEECFMGLLLATVLCIPFWI
VIALGDILDNQRGATINDIFDPLSGGQNSVLSAFFNFSFGMIFFSSNGMLLLMNALMKSYQYLPQGHDISGVNWSKAGKL
LVELVECSIMLAAPVIIVLLVTEILLGVFARYCPQLNAFSLSLTLKSFITFIIFLLYGLNALADEPLKYFSINSLYVFFP
SG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ysaT AAS66848.1 YsaT Not tested SSR-1 Protein 2e-45 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaR1 YP_001907832.1 type III secretion apparatus VFG2453 Protein 4e-35 47
spaR1 YP_001907832.1 type III secretion apparatus VFG1771 Protein 1e-23 41