Gene Information

Name : sitA (ETA_14070)
Accession : YP_001907346.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : iron ABC transporter substrate-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 1594417 - 1595328 bp
Length : 912 bp
Strand : -
Note : silverDB:etchr01397

DNA sequence : 
ATGTCATATTTGTATCGATTAAAAGGATGGCTTTGTGCCGCAGCCTTGGCCACGCTGTGCCTGAATCCCGCTCTGGCACA
GGATAAGTTTAAGGTGATTACCACCTTTACCATCATTGCCGATATGGCGCAGAACGTTGCCGGAGATGCGGCAGAAGTCT
CCTCAATTACCAAACCGGGTGCAGAGATCCATGAATATCAGCCCACCCCCGGCGATATTAAACGCGCCCAGGGTGCACAG
CTGATCCTTGCCAACGGCCTTAGCCTGGAACTGTGGTTTAAGCGTTTTTACCAACACCTCTCCGGCGTGCCGGAAGTCGT
GGTGTCTGACGGCGTTATCCCGATGGGCATCAGCGAAGGCCCTTACAGCGGTAAACCGAATCCTCATGCCTGGATGTCGC
CGAAAAACGCGCTCATTTACGTGGATAATATTCGCGATGCGCTGGTGAAATACGATCCGGCCCATGCTGAAACCTATCGC
CAAAATGCGGCGGCCTACAAAGAAAAAATCGCTGCTACTATCGCCCCGGTACAGCAGGCTCTGGCACAACTGCCGGCAGA
AAAACGCTGGCTGGTTACCAGCGAAGGCGCATTCTCTTATCTGACGCGCGATTTCGGTTTACAGGAACTCTATTTGTGGC
CCATCAATGCCGACCAGCAGGGCACACCACAGCAGGTGCGTAAAGTCATCGATAAAGTCAGGCAGTACAAGATCCCGGCC
GTGTTCAGTGAAAGTACCGTATCCGATAAGGCCGCGCGTCAGGTTGCGCGTGAGACCGGAAGCCATTATGGCGGCGTGCT
GTACGTTGATTCACTCAGCGCCGCAGACGGTCCGGTTCCGACCTATCTTGACCTGCTGCGCGTCACCAGTGAAACCGTGG
TTCGCGGTATTCAACAGGGGTTAGCAAAGTGA

Protein sequence : 
MSYLYRLKGWLCAAALATLCLNPALAQDKFKVITTFTIIADMAQNVAGDAAEVSSITKPGAEIHEYQPTPGDIKRAQGAQ
LILANGLSLELWFKRFYQHLSGVPEVVVSDGVIPMGISEGPYSGKPNPHAWMSPKNALIYVDNIRDALVKYDPAHAETYR
QNAAAYKEKIAATIAPVQQALAQLPAEKRWLVTSEGAFSYLTRDFGLQELYLWPINADQQGTPQQVRKVIDKVRQYKIPA
VFSESTVSDKAARQVARETGSHYGGVLYVDSLSAADGPVPTYLDLLRVTSETVVRGIQQGLAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 2e-103 78
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 2e-103 78
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 2e-103 78
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-103 78
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 2e-103 78

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_001907346.1 iron ABC transporter substrate-binding protein BAC0349 Protein 1e-103 78
sitA YP_001907346.1 iron ABC transporter substrate-binding protein BAC0439 Protein 5e-84 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitA YP_001907346.1 iron ABC transporter substrate-binding protein VFG0525 Protein 1e-103 78