Gene Information

Name : sitB (ETA_14060)
Accession : YP_001907345.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : iron ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 1593617 - 1594420 bp
Length : 804 bp
Strand : -
Note : silverDB:etchr01396

DNA sequence : 
GTGAGCATTCAATCCGTACAGCAGAATGGTATTAAGGTTGATAACCTCACGGTGACCTATCGCAACGGGCATACCGCCCT
GCGCGACGCCTCATTGCAGATCCCCACCGCCAGCATTACTGCGCTACTGGGCATTAACGGTTCCGGAAAATCAACGCTGT
TTAAGGCAATTATGGGCTTCGTACCACTTTCTGCCGGAACGATTACCCTGCTGGATCGTCCTTGCCACAAAGCGCTGAAA
AACAACCTGGTATCCTATGTGCCGCAGTCTGAAGATGTCGACTGGTCGTTTCCGGTCCTCGTTGAGGACGTGGTGATGAT
GGGACGTTATGGTCATATGGGCATGATGCGCATCGCACGTGACGAAGACAAACGCCTGGTCGCCGCTGCACTGGAGCGGG
TTGGTATGACCGATTTTCGTCATCGCCAGATCGGCGAACTTTCCGGCGGCCAGAAAAAGCGCGTGTTTCTCGCTCGCGCC
ATCGCACAGCGTGGTCAGGTGATCCTGCTGGATGAACCCTTTACCGGCGTCGACGTCAATACCGAGCAACAGATCGTCAA
CCTGCTGCACGAGCTGCGCGACGAGGGCCGCACCATGCTGGTCTCTACCCATAACCTGGCGTCCGTCAGGGATTATTGTG
ACCATACGGTTATCGTAAAAGGCACGGTGCTGGCCTGCGGCCCAACGGCCACAACCTTTACCCGCAGCAACCTGGAAAAT
GCCTTTAGCGGCGCATTGCGCGACCTGACGTTCAACGATGCAGAAGAGCTGCCTGCCCTTTCTCTCATTCAGGGAGCTCG
CTGA

Protein sequence : 
MSIQSVQQNGIKVDNLTVTYRNGHTALRDASLQIPTASITALLGINGSGKSTLFKAIMGFVPLSAGTITLLDRPCHKALK
NNLVSYVPQSEDVDWSFPVLVEDVVMMGRYGHMGMMRIARDEDKRLVAAALERVGMTDFRHRQIGELSGGQKKRVFLARA
IAQRGQVILLDEPFTGVDVNTEQQIVNLLHELRDEGRTMLVSTHNLASVRDYCDHTVIVKGTVLACGPTATTFTRSNLEN
AFSGALRDLTFNDAEELPALSLIQGAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 1e-78 71
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 1e-78 71
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 7e-80 71
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 5e-80 71
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 4e-80 71

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_001907345.1 iron ABC transporter ATP-binding protein BAC0350 Protein 2e-80 71
sitB YP_001907345.1 iron ABC transporter ATP-binding protein BAC0440 Protein 5e-67 62
sitB YP_001907345.1 iron ABC transporter ATP-binding protein BAC0400 Protein 1e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sitB YP_001907345.1 iron ABC transporter ATP-binding protein VFG0526 Protein 2e-80 71