|
Name : sitC (ETA_14050) Accession : YP_001907344.1 Strain : Erwinia tasmaniensis Et1/99 Genome accession: NC_010694 Putative virulence/resistance : Virulence Product : iron ABC transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 1592760 - 1593617 bp Length : 858 bp Strand : - Note : silverDB:etchr01395 DNA sequence : ATGGCGTGGTTGGCCGAACCTTTTCACTATCAATATATGCTGAACGCGATGTGGGTTTCAGCGCTGGTTGGCGGCGTTTG CGCCTTCCTTTCCTGCTACCTGATGCTGAAGGGATGGTCATTGATCGGTGACGCGCTGTCGCATTCGATTGTCCCGGGCG TGGCCGGCGCCTATATGCTGGGGCTGCCTTTTGCTCTCGGGGCGTTTCTCTCCGGAGGCCTGGCTGCGGGCAGTATGCTG TTCCTTAATCAGCGTACGCGCCTGAAGGAGGATGCGATTATCGGCCTGATCTTCTCCTCCTTCTTTGGTATCGGGCTGTT TATGGTTTCCCTTAATCCCACGTCGGTCAATATTCAGACCATCGTGCTTGGCAATATTCTGGCCATTGCGCCAGAAGATA TTCTTCAGCTCGCCATCATTGGCTTCACGTCGCTGCTGATATTACTGATTAAATGGAAAGATCTGATGGTGACCTTCTTT GATGAAAACCACGCCCGCTCGGTAGGTCTGAACCCAACGCGCCTGAAGCTGCTGTTTTTCACCCTGCTGGCGGCCTGCAC CATTGCCGCCCTGCAAACCGTTGGCGCTTTCCTCGTTATCTGCCTGGTGGTCACCCCCGCCGCTACCGCTTTTCTCCTTA CCGACCGATTCCCCTCACTACTGATGATTGCGGTGGCTATAGGCAGCGTAACCAGCTTCTTTGGGGCATGGATAAGCTAC TACCTTGACGGCGCAACGGGCGGCATCATCGTGGTGGCGCAGACGCTGGTGTTTCTCACCACGTTCGTGCTGGCCCCTAA ACACGGGCTACTGGCACGGCGCAGACGCGCCGCGCAGTCCTCACAGGAGGCAATATGA Protein sequence : MAWLAEPFHYQYMLNAMWVSALVGGVCAFLSCYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFALGAFLSGGLAAGSML FLNQRTRLKEDAIIGLIFSSFFGIGLFMVSLNPTSVNIQTIVLGNILAIAPEDILQLAIIGFTSLLILLIKWKDLMVTFF DENHARSVGLNPTRLKLLFFTLLAACTIAALQTVGAFLVICLVVTPAATAFLLTDRFPSLLMIAVAIGSVTSFFGAWISY YLDGATGGIIVVAQTLVFLTTFVLAPKHGLLARRRRAAQSSQEAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 4e-82 | 86 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 4e-82 | 86 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-82 | 86 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-82 | 86 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 3e-82 | 86 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 5e-34 | 41 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 9e-34 | 41 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 9e-34 | 41 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 7e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sitC | YP_001907344.1 | iron ABC transporter | BAC0351 | Protein | 2e-82 | 86 |
| sitC | YP_001907344.1 | iron ABC transporter | BAC0441 | Protein | 9e-67 | 68 |
| sitC | YP_001907344.1 | iron ABC transporter | BAC0442 | Protein | 2e-30 | 42 |
| sitC | YP_001907344.1 | iron ABC transporter | BAC0352 | Protein | 3e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sitC | YP_001907344.1 | iron ABC transporter | VFG0527 | Protein | 2e-82 | 86 |
| sitC | YP_001907344.1 | iron ABC transporter | VFG0528 | Protein | 3e-34 | 41 |
