Gene Information

Name : rfbB (ETA_13390)
Accession : YP_001907278.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Virulence
Product : O-antigen ABC transporter ATP-binding protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1134
EC number : -
Position : 1514540 - 1515280 bp
Length : 741 bp
Strand : +
Note : silverDB:etchr01329

DNA sequence : 
ATGAGTGTTGTGATCGAATTTGCCAATGTAACTAAAACATACCCGCTCTATCATCATATTGGATCTGGCATAAAAGAGCT
GCTATTTAATCCACGAAGAGCACTGAGTTTGTTAAGTGGGCGCAGCTATCTTGCTATAGAAGATATAAATTTCAAAATTG
AGAAGGGTGAATCTGTCGCTTTAATCGGCCGAAACGGTGCGGGTAAAAGTACAACTCTCGGTTTGGTTGCTGGTGTTATG
AAGCCAACAACAGGCAAGGTCAACGTTGTTGGGCGTGTGGCATCGATGTTGGAACTCGGTGGTGGCTTTCACCCAGAGTT
GACTGGAAGAGAAAATATCCGTCTCAATGCTACACTTTTGGGGTTAAGACGCAAAGAGCTTAAATCTCGTATAAATGAGA
TTATAGAATTCTCGGAATTAGGCGAGTTCATTGATGAACCAATACGCGTATATTCCAGTGGAATGTTGGCTAAACTAGGT
TTCTCTGTTATCTCACAGGTAGATCCAGATATTTTAATTATTGACGAGGTTTTGGCAGTCGGAGATATTGCGTTCCAGAA
AAAATGTATCAACACTATAAATGCTTTTAAAAGCAAAGGCGTCACAATTCTTTTTGTCAGTCATAATTTATCAGATGTAG
AAAAAATTTGTGATCGTGTCATCTGGATAGAAAATCATCGTCTAAAAATGACTGGCAATTCAAGCGAAGTTATCAATGCT
TATAAAATCGCAATGGCATAA

Protein sequence : 
MSVVIEFANVTKTYPLYHHIGSGIKELLFNPRRALSLLSGRSYLAIEDINFKIEKGESVALIGRNGAGKSTTLGLVAGVM
KPTTGKVNVVGRVASMLELGGGFHPELTGRENIRLNATLLGLRRKELKSRINEIIEFSELGEFIDEPIRVYSSGMLAKLG
FSVISQVDPDILIIDEVLAVGDIAFQKKCINTINAFKSKGVTILFVSHNLSDVEKICDRVIWIENHRLKMTGNSSEVINA
YKIAMA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rfbB YP_001907278.1 O-antigen ABC transporter ATP-binding protein VFG0258 Protein 6e-27 41
rfbB YP_001907278.1 O-antigen ABC transporter ATP-binding protein VFG2228 Protein 4e-34 41