Gene Information

Name : cpsH (ETA_13220)
Accession : YP_001907261.1
Strain : Erwinia tasmaniensis Et1/99
Genome accession: NC_010694
Putative virulence/resistance : Unknown
Product : polysaccharide export periplasmic protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1596
EC number : -
Position : 1494120 - 1495262 bp
Length : 1143 bp
Strand : +
Note : silverDB:etchr01312

DNA sequence : 
ATGAAACAGATGATTATAATCAAAACTAAATTGATACCTCTGATGGTATCGGCGGCACTCCTTTCCGGCTGTACCATCAT
GCCAGGTAACCATCTCTCCACAACGGGCAAAGATGTTGTTGAACAGCAGGACAGCGATTTTGACATCGATAAGTATGTCA
ACGTTTTCCCCTTGACGCCGAGCCTGGTTGAGCGCATGAGGCCTAAGCCGGTGGTGGCCCAGGCGAACCCTTTGCTGCAA
CGCGAACTGCAGAATTACGAATACCGTATTGGCGTGGGTGATGTGCTAACGGTAACCGTTTGGGATCATCCCGAACTCAC
TACGCCTGCGGGCCAATACCGCAGTGCCAGCGATACCGGTAATTGGGTTCACTCGGACGGCACCATCTTCTATCCCTATA
TCGGCAGAGTGCATGTCGCCGGTCGCACCGTGCAGCAAATTCGCGATGAAATTTCCGGCCGCCTGACTAAATACATCGAA
AGCCCGCAGATTGACGTCAGTGTGGCCTCGTTTAAATCGCAAAAAACTTATGTGACTGGTGAAGTGGCCACCTCAGGTCA
GCAGGCAATAACTAACGTACCTCTGACTATCCTTGATGCGATTAACTCTGCCGGTGGCCTGACGGCTAACGCTGACTGGC
GCAACGTTGTCCTGACGCATAACGGGCGCGAACAGCCTGTCTCGCTTCAGGCACTGATGCAAAATGGTGACCTGTCACAA
AATCACCTGTTGTACCCCGGCGATATTCTTTACGTGCCGCGTAATGACGATCTTAAAGTGTTCGTGATGGGTGAGGTTAA
GCAGCAGGCAACGTTGAAAATGGATCGCAGTGGGATGACGCTCGCGGAAGCGTTGGGTAATGCTCAGGGCATGGATCAGA
ACGTCGCTGATGCCACCGGCGTGTTCGTTATTCGGCCTGTTAAAGGTTCAAATCGTAGCAAAATCGCCAATATCTATCAG
TTAAATACTAAAGATGCTGCCGCGATGGTGATGGGAACCGAATTCCGCTTAGAACCTTACGACATCGTCTATGTCACTTC
GACGCCTCTTTCGCGTTGGAATCGTGTTATTTCACAGCTGGTTCCAACCATTAACGGTGTCTACGACGCGACACGCAACG
TTCAGATTATTCATAACTGGTAA

Protein sequence : 
MKQMIIIKTKLIPLMVSAALLSGCTIMPGNHLSTTGKDVVEQQDSDFDIDKYVNVFPLTPSLVERMRPKPVVAQANPLLQ
RELQNYEYRIGVGDVLTVTVWDHPELTTPAGQYRSASDTGNWVHSDGTIFYPYIGRVHVAGRTVQQIRDEISGRLTKYIE
SPQIDVSVASFKSQKTYVTGEVATSGQQAITNVPLTILDAINSAGGLTANADWRNVVLTHNGREQPVSLQALMQNGDLSQ
NHLLYPGDILYVPRNDDLKVFVMGEVKQQATLKMDRSGMTLAEALGNAQGMDQNVADATGVFVIRPVKGSNRSKIANIYQ
LNTKDAAAMVMGTEFRLEPYDIVYVTSTPLSRWNRVISQLVPTINGVYDATRNVQIIHNW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 1e-129 65