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Name : thiC (xccb100_0879) Accession : YP_001902284.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 1007360 - 1009237 bp Length : 1878 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAATGCCGCGCCCACCGTTTTGCTGCAACAGACCCAGACGCTCTCGGCAGCTGTGACCCAGCCGATTCCCGGTTCCCG CAAGATCTTCGTGCAAGGTTCGCGTGCAGATCTTCAGGTGCCGATGCGCGAGATCGTGCTGACCCGCACGCCGACGCTGT TCGGTGGGCAGGACAACCCGCCGCTGAGTGTCTACGACACTTCCGGCCCCTACACCGATCCGCAGGCGGCGATCGATCTT GCTGCCGGCCTTGCGCCGTTGCGTGCCGACTGGATTGCCGAACGTGGCGACACGCTGCCATTGGAGGCACTGAGTTCCAG CTTCGGTCGTGGTCGCGAGCATGATGCGCGGCTGGATGCAGTGCGCTTCCCGTCGCGACGGTTGCCACGCGTGGCGCGCA GCGGTGCCAATGTGACGCAGATGCATTACGCGCGCCGCGGCATCATCACCCCGGAGATGGAGTTCGTTGCCATTCGCGAA AACCAGCGGCTGGAAGCGGTCACCGATGCGGTGTTGCGCAAGCAGCACCCGGGCGAAGCCTTCGGTGCGGCAATCCAGCA GCGCATCACCCCGGAGTTCGTACGCGAGGAGATCGCGCGCGGCCGTGCAATTTTGCCCAATAACATCAACCATCCGGAAA GCGAGCCGATGATCATCGGCCGCAACTTCCTGACCAAGATCAACGCCAACATCGGCAACAGTGCGGTGTCGTCTGGCATT GCCGAAGAGGTGGAAAAACTGGTGTGGTCGATCCGTTGGGGCGGCGACACGGTGATGGACCTGTCGACCGGCAAGCACAT CCATGAAACGCGTGATTGGATCATCCGCAATTCGCCGGTACCGATCGGCACCGTGCCGATCTACCAGGCACTGGAAAAGG TCGACGGCCGTGCGGAAGAGCTCACCTGGGAGATTTTCCGCGACACCTTGATCGAGCAGGCCGAGCAGGGCGTGGACTAC TTCACCATCCACGCGGGCGTGCTGCTGCGTTATGTCCCGCTCACGGCCCGGCGTGTCACCGGCATCGTGTCGCGTGGCGG TTCGATCCTGGCGAAGTGGTGTCTGGCACATCACAAGGAAAACTTTCTCTACACGCACTTCGAAGACATCTGCGAAATCA TGAAGGCCTACGACGTGGCGTTTTCGCTGGGCGATGGCTTGCGCCCCGGCTGCATTGCCGATGCCAACGACGCGGCCCAG TTCGGTGAACTGGAGACGCTTGGCGAGTTGACCAAGCTCGCCTGGAAGCACGACGTGCAGACCATGATCGAAGGGCCAGG CCATGTGCCGATGCAGCTGATCAAGGAGAACATGGACAAGCAGCTGCGCGAGTGCGGCGAGGCGCCGTTCTATACGCTGG GCCCGCTCACCACCGATATCGCACCTGGCTACGATCACATCACCAGCGCCATCGGTGCGGCGATGATCGGCTGGTTCGGC ACTGCCATGCTTTGCTATGTCACCCCCAAGGAACACTTGGGCCTGCCCAACCGCCAGGATGTGCGCGACGGGATCATGGC CTACAAGATCGCCGCGCATGCGGCCGACCTTGCCAAGGGCCATCCCGGTGTGCAGGTGCGTGACAACGCACTGAGTAAGG CCCGCTTCGAGTTCCGCTGGGATGACCAGTTCCATCTCGGTCTGGATCCTGAGAAAGCCAAGGAGTTCCACGACGAAACC CTGCCCAAGGACGCGCACAAACTGGCGCACTTCTGCTCGATGTGCGGCCCGCACTTCTGTTCGATGAAAATCACCCAGGA TGTGCGCGACTACGCGGCTGAGCACGGCATCAGCGAGGACCATGCGCTAGAGGCGGGCATGCAGGAGAAGTCTGGAGAAT TTGTGGCACAGGGCGCACAGGTGTATCGGGCGTCGTAG Protein sequence : MNAAPTVLLQQTQTLSAAVTQPIPGSRKIFVQGSRADLQVPMREIVLTRTPTLFGGQDNPPLSVYDTSGPYTDPQAAIDL AAGLAPLRADWIAERGDTLPLEALSSSFGRGREHDARLDAVRFPSRRLPRVARSGANVTQMHYARRGIITPEMEFVAIRE NQRLEAVTDAVLRKQHPGEAFGAAIQQRITPEFVREEIARGRAILPNNINHPESEPMIIGRNFLTKINANIGNSAVSSGI AEEVEKLVWSIRWGGDTVMDLSTGKHIHETRDWIIRNSPVPIGTVPIYQALEKVDGRAEELTWEIFRDTLIEQAEQGVDY FTIHAGVLLRYVPLTARRVTGIVSRGGSILAKWCLAHHKENFLYTHFEDICEIMKAYDVAFSLGDGLRPGCIADANDAAQ FGELETLGELTKLAWKHDVQTMIEGPGHVPMQLIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWFG TAMLCYVTPKEHLGLPNRQDVRDGIMAYKIAAHAADLAKGHPGVQVRDNALSKARFEFRWDDQFHLGLDPEKAKEFHDET LPKDAHKLAHFCSMCGPHFCSMKITQDVRDYAAEHGISEDHALEAGMQEKSGEFVAQGAQVYRAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 73 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 73 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 71 |
