Gene Information

Name : nagA (xccb100_0787)
Accession : YP_001902192.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG1820
EC number : -
Position : 887592 - 888746 bp
Length : 1155 bp
Strand : +
Note : -

DNA sequence : 
ATGGATGCTTCCCCGATTCAAGCGCTTTGCAATGCACGCGTGCTCACCGATGACGGCCTGCAGGACGGCCTGGCCGTGCT
GCTGGACGGCGCGCAGATCCAGGCCGTTGTCGCGGCCGACGATGCGCGCGTGGCGCAGGCCGGCACGCGCGTGGATCTGG
GCGGGGCGACCCTGCTGCCCGGCTTCATCGACATCCAGGTCAATGGCGGCGGCGGGGTGTTGTTCAACAACGCCTGCACG
CCGCAGGCGCTGGCGACGATCGCCGCAGCGCATCGCCGCTACGGCACCACCGGCATGTTGCCCACGCTGATCAGCGACAC
CGCCGAGGTGATGGCCGAGGCCATCGCCGCCACGCGCCAGGCGATCGCACAGGGCGTGCCGGGCGTGCTCGGGATTCATC
TGGAAGGCCCGTACCTGAGCCCGGCGCGCAAAGGCACCCACGACGCACAGAAGTTCCGCGTGCCCGACGCGCACGAGATC
GCGGTGGACACCTCGCTGGACAACGGCGTCACCCTGATCACGCTCGCGCCCGAGCGCGTGCCGCTGGACGACATCCGCGC
CTTTGTCGCCGGTGGTGCAGTTGTGTTTGCAGGCCATACCGCCGCGACCTACGAACAGGCGCGCGACGGCATTGCCGCCG
GCGTCAGCGGCTTCACCCATCTGTACAACGCGATGTCGCCACTGGCCGGGCGCGAGCCCAATGCCGTGGGCGCCGCACTG
GAAGATCCTGCGGTGTGGTGCGGCGTCATCGTGGACGGCGTGCATGTGCATCCGGCCAGCCTGCGCGTGGCGCTGGCCGC
CAAGCCGCGCGGCAAGCTGCTGCTGGTCACCGACGCCATGCCGATGGTCGGCGCCGACAGCCCCAGCTTCGATCTGTACG
GCGAAACCATCACCGCCATCGACGGCGTGGTACGCAATGCCGCCGGTGCGCTTGCCGGCTCCGCGCTGGACATGGCCACC
GCGGTGCGCAACAGCGTGCAATGGCTGGGCGTGGACCTGGCCGAAGCCGCGCGCATGGCGTCCACCTATCCGGCGCAGTG
CATCGGCCTGGGCGAGCGCCTGGGCCGCATCGCACCGGGTTACCAGGCCGACCTGGTGCTGGTGGATGCAGACGTGCACG
TGCTGGACACCTGGGTGGCGGGGCAGCGCGACTGA

Protein sequence : 
MDASPIQALCNARVLTDDGLQDGLAVLLDGAQIQAVVAADDARVAQAGTRVDLGGATLLPGFIDIQVNGGGGVLFNNACT
PQALATIAAAHRRYGTTGMLPTLISDTAEVMAEAIAATRQAIAQGVPGVLGIHLEGPYLSPARKGTHDAQKFRVPDAHEI
AVDTSLDNGVTLITLAPERVPLDDIRAFVAGGAVVFAGHTAATYEQARDGIAAGVSGFTHLYNAMSPLAGREPNAVGAAL
EDPAVWCGVIVDGVHVHPASLRVALAAKPRGKLLLVTDAMPMVGADSPSFDLYGETITAIDGVVRNAAGALAGSALDMAT
AVRNSVQWLGVDLAEAARMASTYPAQCIGLGERLGRIAPGYQADLVLVDADVHVLDTWVAGQRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1783 NP_231418.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-51 45
nagA-2 YP_001217323.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-51 45
nagA ACA01848.1 N-acetylglucosamine-6-phosphate deacetylase Not tested VPI-2 Protein 2e-51 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
nagA YP_001902192.1 hypothetical protein VFG1116 Protein 1e-51 45