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Name : xcsF (xccb100_0774) Accession : YP_001902179.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Virulence Product : type II protein secretion system protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 876648 - 877844 bp Length : 1197 bp Strand : + Note : - DNA sequence : ATGGCGAAGTTTGATTACACCGTGCTGGATCTGCACGGCCGCAATCGCCACGGCGTGATCAGCGCCGACAGCGTGCGCAG TGCGCGCAGCTTGCTGGAGCAGCGCCAATGGGTGCCGTTGCGGGTGGAGCCGGCAGCGGCCATCACGCCGGTGCGTGCGG CGCGCTTCAGCGGCAAGGATCTGGTGTTGTTCACTCGCCAGCTTGCCACGCTGGTGGACACCGCACCGCTGGAAGAAGCG CTGCGTACCATCGGCACCCAGTCCGAGCGCCGCGGCGTGCGCGCGGTGACCGGGCAGACGCATGCCTTGGTGGTCGAAGG TTTCCGCCTCTCCGATGCGATGGCGCGCCAGGGCACTGCCTTCCCGCCGCTGTACCGCGCGATGGTGGCGGCCGGCGAAA GCGCCGGGGCCTTGCCGCAGGTGCTCGAGCGCCTGGCCGACCTGCTCGAGCGCCAGGCGCAGGTGCGCAGCAAGCTGCAA TCCGCACTGGTGTACCCGGCAGCGTTGGCAATGACTGCCGGCGTGGTGGTCATCGTGCTGATGACCTTTGTGGTGCCCAA GGTGGTGGACCAGTTCGATTCGATGGGCCGCGCACTGCCGTGGCTCACCCGCGCAGTCATCGCACTCTCGCAGTTTCTGC TGCATGCCGGCATTCCATTGCTGGTGGCCGGCGTGATCGCGGCGGTGGTGGCCGTGCAGTTGCGCAAGCGCCCGCCGGTG CGGCTGGCGATCGACCGGGCGATCCTACGCGCGCCGCTGCTGGGGCGCTTGCTGCGTGATCTGCATGCCGCGCGCATGGC GCGCACCCTGGCGATCATGGTCAACAGCGGCCTGCCGTTGATGGAAGGGCTGATGATCGCCGCACGCACCGTGGACAACC ACGCGCTGCGCCTGGCCACCGACAGCATGGTCACCGCCATCCGCGAAGGCGGCAGCCTGGGCGCGGCGATGAAGCGCGCG GGCGTGTTTCCACCCACCTTGTTGTACATGGCCTCCAGCGGCGAAAACAGCGGGCGCCTGGCGCCGATGCTGGAACGTGC CGCTGACTATCTGGAGCGCGAATTCGAGTCGTTCACCACTGCGGCGATGAGCCTGCTGGAGCCGCTGATCATCGTGCTGC TGGGCGGCGTGGTGGCAGTGATCGTGTTGTCCATCCTGTTGCCCATTTTGCAATTCAACACCTTGGCACTCGGCTGA Protein sequence : MAKFDYTVLDLHGRNRHGVISADSVRSARSLLEQRQWVPLRVEPAAAITPVRAARFSGKDLVLFTRQLATLVDTAPLEEA LRTIGTQSERRGVRAVTGQTHALVVEGFRLSDAMARQGTAFPPLYRAMVAAGESAGALPQVLERLADLLERQAQVRSKLQ SALVYPAALAMTAGVVVIVLMTFVVPKVVDQFDSMGRALPWLTRAVIALSQFLLHAGIPLLVAGVIAAVVAVQLRKRPPV RLAIDRAILRAPLLGRLLRDLHAARMARTLAIMVNSGLPLMEGLMIAARTVDNHALRLATDSMVTAIREGGSLGAAMKRA GVFPPTLLYMASSGENSGRLAPMLERAADYLEREFESFTTAAMSLLEPLIIVLLGGVVAVIVLSILLPILQFNTLALG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-52 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 9e-52 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcsF | YP_001902179.1 | type II protein secretion system protein F | VFG0181 | Protein | 2e-49 | 42 |
| xcsF | YP_001902179.1 | type II protein secretion system protein F | VFG2049 | Protein | 1e-51 | 41 |
