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Name : xcsE (xccb100_0773) Accession : YP_001902178.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Virulence Product : type II protein secretion system ATPase Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 875162 - 876661 bp Length : 1500 bp Strand : + Note : - DNA sequence : ATGTCGACCACCACCCCCACGGCCACGCTGTCGTACGCGTTTGCCAAGCGCCACGGCGTGGTGCTGCTCGGCGGCGAGAG CGCCGCGCACGCACAGGTCGGCCTGCGCGCCGGCGGTGATGTGCAGGCCTTGATCGAAGTGCGCCGCGTGCTTGGCGTGC CGTTGCAGGTACGCACGTTGGAACCGGCGGTGTTCGACCGGCACGTGTCGGAAATCTATGCCGATGCCGGGCTGGAGCAG GGCATGCCTGTGGAAGCGCTGGACCTGCACGGCAGCCTGGATTCGCTGATCGAAGACATCCCTACCGCCGATCTGCTCGA CAGCCAGGACGATGCGCCGATCATCCGCCTGATCAACGGCATCATCGCCGAGGCCGCACGCCTGGGTGCGTCCGACGTGC ATCTGGAATCGTACGAGTCGCGCCTGCGCGTGCGCTTGCGCGTGGACGGGGTGATGCGCGAAGCGGCCACCTTGCCGGGG CGGATCGCGCCGTTGCTGGTCTCGCGCGTCAAGGTAATGGCGCGCCTGGATATCGCCGAAAAACGCATCCCGCAAGATGG CCGGGTGTCGTTGGCCATGGGTGCCAAGGCGCTGGATGTGCGCGTCTCTACCCTGCCCACCCGCGGCAGCGAACGCGTGG TGCTGCGTATCCTGGACAAGGAGCAGGGCACCTTGTCGCTGACCCAGTTGGGCATGCCCGCGGGTGTGATGGGCGCAGTG CAACGTGCGCTGCAGGTGCCCAACGGCATCGTGCTGGTGACCGGGCCCACCGGCTCGGGCAAGACCACCACGCTGTATGC CGGGCTGAGCCTGCTCAACGACGGTTCGCGCAACATCCTCACCGTCGAAGACCCGGTGGAATACGCCATCGACGGCGTTG GCCAGACCCAGGTCAATGCGCGCGTGGGCATGACCTTTGCCGCCGGCCTGCGCGCAATCCTGCGCCAGGACCCGGACGTG GTGATGATCGGCGAGATCCGCGATACCGAAACCGCGCAGATCGCCGTGCAGGCCAGCCTCACCGGCCACCTGGTGCTGTC CACCGTGCACACCAACGATGCGGTGGGTGCGGTCACGCGCCTGCGCGACATGGGCATCGAACCATTCCTGCTGGCCTCCA GCCTGCGCCTGATCCTGGCGCAGCGGCTGGTGCGCCGGCTGTGCACGCACTGCCGCACGCCACGGCCGCTGGATGCGGCC ACCACGCAGATGCTGGGCACGTCTACCGATGCGGTGATCTACAGCGCCGCCGGCTGTGCGGCCTGTCACCACAGTGGCTA CGCCGGGCGCGTGGGGATCTACGAAGCCATCACTGTCGACGACACGCTGCGCCGGCTGATCGGCGACAACGCCGACGAAG ACGCATTGGCCGCCGCGGCCTTCGTACGTGCGCCACGGCTGAGCGACGCCGCGCGCGCGGCCGTGCTGCAAGGCGCGACC ACGCTGGAAGAAGCCTTGCGCGTCACCCGTCAGCAGGACGAGGCGCATGGCGAAGTTTGA Protein sequence : MSTTTPTATLSYAFAKRHGVVLLGGESAAHAQVGLRAGGDVQALIEVRRVLGVPLQVRTLEPAVFDRHVSEIYADAGLEQ GMPVEALDLHGSLDSLIEDIPTADLLDSQDDAPIIRLINGIIAEAARLGASDVHLESYESRLRVRLRVDGVMREAATLPG RIAPLLVSRVKVMARLDIAEKRIPQDGRVSLAMGAKALDVRVSTLPTRGSERVVLRILDKEQGTLSLTQLGMPAGVMGAV QRALQVPNGIVLVTGPTGSGKTTTLYAGLSLLNDGSRNILTVEDPVEYAIDGVGQTQVNARVGMTFAAGLRAILRQDPDV VMIGEIRDTETAQIAVQASLTGHLVLSTVHTNDAVGAVTRLRDMGIEPFLLASSLRLILAQRLVRRLCTHCRTPRPLDAA TTQMLGTSTDAVIYSAAGCAACHHSGYAGRVGIYEAITVDDTLRRLIGDNADEDALAAAAFVRAPRLSDAARAAVLQGAT TLEEALRVTRQQDEAHGEV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 3e-116 | 53 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-116 | 53 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xcsE | YP_001902178.1 | type II protein secretion system ATPase | VFG0182 | Protein | 2e-118 | 55 |
| xcsE | YP_001902178.1 | type II protein secretion system ATPase | VFG2048 | Protein | 2e-116 | 52 |
| xcsE | YP_001902178.1 | type II protein secretion system ATPase | VFG1876 | Protein | 8e-120 | 51 |
| xcsE | YP_001902178.1 | type II protein secretion system ATPase | VFG2426 | Protein | 1e-78 | 49 |
| xcsE | YP_001902178.1 | type II protein secretion system ATPase | VFG0112 | Protein | 5e-80 | 44 |
