Gene Information

Name : hemC (xccb100_0685)
Accession : YP_001902090.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 774171 - 775085 bp
Length : 915 bp
Strand : +
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
ATGACCACGCTGCGCATCGCCACCCGTAAGAGCCCGCTTGCCCTCTGGCAGAGCGAACACGTCGCCACCGCGCTGCGCCA
GCACCACCCCGGGCTGGAGGTCGTGCTGGTGCCGATGAGCACCCGCGGCGATGAAGTGCTGGACCGCTCGCTGGCCGCCA
TCGGCGGCAAGGGCCTGTTCCTCAAGGAACTGGAGCTGGCCATGTTGCGCGGCGAGGCCGATTGCGCCGTGCACTCGCTC
AAGGACGTGCCCATGGAGCTGGACGCGCCGTTCGTGCTGCCGGCCATCCTGGAACGCGGCGACCCGGCCGATGCGCTGGT
GTCCAACCTCTACGCCACCTTGCAGGCCCTGCCGCTGGGCGCACGCGTGGGCACCTCGTCGTTACGCCGCCAGGCGCAAC
TGCGCGCCGCGCGCCCGGACCTGGAATTGATCGACTTGCGCGGCAACGTCAACACCCGCCTGGCCAAGCTCGACAACGGC
GGCTACGACGCCATCGTGCTGGCCTGCGCCGGCCTGCAGCGGCTGGGCCTGGAAGCCCGCATCACCGCGCGGCTGGACGC
ACCGGAGTGGCTGCCGGCACCGGCGCAAGGCGCGGTGGCGGTGGAATGCCGCGGCGACGATGCCCGCATCCACGACCTGC
TGGCAGTGCTGGATGCCGGCCGCACGCGCGCCTGCGTCGAGGCCGAGCGCGCGATGAATCGCGCCCTGCACGGCAGTTGC
CACGTGCCGGTGGCCGCCTTCGCGCGCTGGGAAGGCGAGGACCTGTTCCTGCAGGGCATGGTGGGCAGTGCCAGCGACGG
CCGCCTGATCCACGCCGAGGCGCACGGTAGCCCCGACGCCACCGAAGACCTCGGCCGCCGAGTCGCCGACGGCCTGTTCG
AAAAGGGCGCCGCACAGCTGCTGGCGGAGCTGTAA

Protein sequence : 
MTTLRIATRKSPLALWQSEHVATALRQHHPGLEVVLVPMSTRGDEVLDRSLAAIGGKGLFLKELELAMLRGEADCAVHSL
KDVPMELDAPFVLPAILERGDPADALVSNLYATLQALPLGARVGTSSLRRQAQLRAARPDLELIDLRGNVNTRLAKLDNG
GYDAIVLACAGLQRLGLEARITARLDAPEWLPAPAQGAVAVECRGDDARIHDLLAVLDAGRTRACVEAERAMNRALHGSC
HVPVAAFARWEGEDLFLQGMVGSASDGRLIHAEAHGSPDATEDLGRRVADGLFEKGAAQLLAEL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 1e-57 52
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 1e-57 52