Gene Information

Name : xccb100_0611 (xccb100_0611)
Accession : YP_001902016.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : IS1477 transposase ORFA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 687465 - 687731 bp
Length : 267 bp
Strand : -
Note : -

DNA sequence :
ATGAAGAAGAGTCGTTTCAGCACCGAGCAGATCATCGGATTCATCAAGCAGGCGGATGCCGGGATGGCGGTGGCTGAGCT
GTGCCGCCAGCACGGTTTCAGCCCGGCCAGCTTCTACCAGTGGCGGGCCAAGTACGGCGGCATGGAGGCCGAAGACGCGA
AGCGCCTGAAGGAGCTGGAGCAGGAGAACAACCGCCTGAAGCGGTTGCTGGCCGAGGCGCACCTGGACATCGAGGCGCTG
AAGGTCGGGTTCGGGGTAAAACGCTAG

Protein sequence :
MKKSRFSTEQIIGFIKQADAGMAVAELCRQHGFSPASFYQWRAKYGGMEAEDAKRLKELEQENNRLKRLLAEAHLDIEAL
KVGFGVKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 2e-25 73
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-25 73
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-25 73
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-25 73
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 4e-16 52
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-16 52
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 9e-19 51