Gene Information

Name : xccb100_0610 (xccb100_0610)
Accession : YP_001902015.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : IS1477 transposase ORFB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 686599 - 687432 bp
Length : 834 bp
Strand : -
Note : -

DNA sequence :
ATGTGCGAGCTGACGTCGATCAGCGAGCGCCGGGCTTGTCGCCTTGCGGGGATCTCCCGCGATGCTTTCCGCCACGCGCC
GACACCCACGCCGGCGACGCAAACCCTGTCGGCCAGACTGGTGGAACTGGCGCAGGCGCGTCGCCGCTTCGGCTATCGCC
GCCTGCACGACCTGCTGCGCCCGGAGTTTCCGCAGGTGAACCATAAGAAGATCTACCGTCTGTACCGCGAGGCGAAGCTG
AGCGTGCGCCGGCGCAAGAAGGCCAAGTTCCCGGCGGCACAGCGGCAGCCGTTACGGCCAGCGCGGCATCCCAACGAGGT
AATCAGCATGGACTTCGTCTTTGATCAGTTGGCCAGTGGCCGCCGCATCAAATGCCTGACCGTCGCCGACGACTTCACCC
ATGAATGCGTGGACATCGCGGTGGACCATGGCATCAGCGGGGCTTACGTGGTGCGTGTGCTGGAGCAGATCGCCTGCTTC
CGCGGCTATCCCCGCGCGGTGCGCACGGACAACGGCCCGGAGTTCACCAGCCGCGCCTTCATCGCTTGGGCACAGCAGCG
TGGCATCGAACACATCCTGATCGAACCCGGCAAACCCATGCAGAACGGCTACATCGAGAGCTTCAACGGCAAGTTCCGCG
ACGAATGTCTCAACGAACACTGGTTCACGTCGCTGATCCAGGCTCGCGAGGTCATCGCCGATTGGCGGCGTGACTTCAAC
GAGGTACGTCCGCACAGCAGCTGTGGTCGCATCCCGCCAGCGCAGTTTGCCTCCAACCACCGAGCACAAACCGGCAACAA
CGCAGTACCCTTCAACCCCGGGCTTTATCAGTAA

Protein sequence :
MCELTSISERRACRLAGISRDAFRHAPTPTPATQTLSARLVELAQARRRFGYRRLHDLLRPEFPQVNHKKIYRLYREAKL
SVRRRKKAKFPAAQRQPLRPARHPNEVISMDFVFDQLASGRRIKCLTVADDFTHECVDIAVDHGISGAYVVRVLEQIACF
RGYPRAVRTDNGPEFTSRAFIAWAQQRGIEHILIEPGKPMQNGYIESFNGKFRDECLNEHWFTSLIQAREVIADWRRDFN
EVRPHSSCGRIPPAQFASNHRAQTGNNAVPFNPGLYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 4e-58 63
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 4e-75 62
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 3e-45 57