Gene Information

Name : xylA2 (xccb100_4305)
Accession : YP_001905710.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG2115
EC number : -
Position : 4874828 - 4876168 bp
Length : 1341 bp
Strand : +
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGAGCAACACCGTTTTCATCGGCGCGAAAGAATATTTCCCCGGCATCGGCAAGATCGGCTTCGAAGGCCGCGATTCGGA
CAACCCGCTTGCGTTCAAGGTGTACGACGCCAACAAGCAGGTCGCCGGCAAGACCATGGCCGAGCACCTGCGCTTTGCAG
TGGCTTACTGGCACAGCTTCTGCGGCAATGGCGCCGATCCGTTCGGCCCGGGCACGCGTGCGTATCCGTGGGATGTGGGC
AACACCGCGCTGGCACGTGCCGAGGCCAAGTCCGATGCCGCGTTCGAATTCTTCACCAAGCTCGGCGTGCCGTACTACTG
CTTCCACGACATCGATCTGGCGCCGGATGCGGACGACATCGGCGAGTACGAAAACAACCTCAAGCACATGGTGGGCATTG
CCAAGCAGCGCCAGGCCGACACCGGCGTCAAGCTGCTGTGGGGCACCGCCAATCTGTTCTCGCACCCGCGCTACATGAAT
GGTGCGTCCACCAATCCGGACTTCAACGTCGTGGCGCGCGCCGCGGTGCAGGTCAAGGCCGCGATCGATGCCACGGTGGA
GTTGGGCGGCGAGAACTACGTATTCTGGGGCGGTCGCGAAGGCTACGCCTGCCTGCACAACACGCAAATGAAGCGCGAGC
AGGACAACATGGCGCGCTTCCTCACCCTGGCGCGCGACTACGGCCGTGCAATTGGCTTTACCGGCAACTTCCTGATCGAG
CCCAAGCCAATGGAGCCCATGAAGCACCAGTACGATTTCGACAGCGCCACGGTGATCGGCTTCCTGCGCCAGCACGGCCT
GGACCAGGATTTCAAGCTGAATATCGAAGCCAACCACGCCACGCTGTCCGGCCACAGCTTCGAGCACGACCTGCAGGTGG
CCAGCGATGCCGGCCTGCTCGGCAGCATCGATGCCAACCGCGGCAACCCGCAGAACGGCTGGGATACCGACCAGTTCCCG
ACCGACCTGTACGACACCGTCGGCGCGATGCTGGTAGTGCTGCGGCAGGGCGGGCTGGCACCGGGCGGGCTGAACTTCGA
TGCCAAGGTGCGGCGTGAATCGTCCGACCCGCAGGACCTGTTCCTGGCACACATCGGCGGCATGGATGCGTTCGCACGCG
GGCTGGAAGTGGCCAATGCGCTGTTGACCTCCTCACCGCTGGAAACCTGGCGCGCGCAGCGTTACGCCAGCTTCGACAGC
GGCGCGGGCGCAGACTTTGCCAACGGCACCAGCACGCTGGCGGATCTGGCCAAGTACGCCGCCGGCAAGGGCGAGCCGAC
GCAAGTCAGCGGCCGCCAGGAAGCCTACGAGAACCTGATCAATCAGTATCTGACGCGTTGA

Protein sequence :
MSNTVFIGAKEYFPGIGKIGFEGRDSDNPLAFKVYDANKQVAGKTMAEHLRFAVAYWHSFCGNGADPFGPGTRAYPWDVG
NTALARAEAKSDAAFEFFTKLGVPYYCFHDIDLAPDADDIGEYENNLKHMVGIAKQRQADTGVKLLWGTANLFSHPRYMN
GASTNPDFNVVARAAVQVKAAIDATVELGGENYVFWGGREGYACLHNTQMKREQDNMARFLTLARDYGRAIGFTGNFLIE
PKPMEPMKHQYDFDSATVIGFLRQHGLDQDFKLNIEANHATLSGHSFEHDLQVASDAGLLGSIDANRGNPQNGWDTDQFP
TDLYDTVGAMLVVLRQGGLAPGGLNFDAKVRRESSDPQDLFLAHIGGMDAFARGLEVANALLTSSPLETWRAQRYASFDS
GAGADFANGTSTLADLAKYAAGKGEPTQVSGRQEAYENLINQYLTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 1e-104 52
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 2e-104 52