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Name : xerD (xccb100_3700) Accession : YP_001905105.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Unknown Product : site-specific tyrosine recombinase XerD Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 4198681 - 4199652 bp Length : 972 bp Strand : - Note : site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers d DNA sequence : ATGTCTGCCAGCAGTCCCGCCGAACGCCGCCAACGTGCCCAGCAACTGCCGCCCCTGCGGGCGGAGGACGATCAGGCGAT CCAGCGCTTCCTGGATCGGTTGTGGGCCGAACAGGGCGTGGCGCGCCAGACCCTGGACAGCTATCGGCGCGATCTGGAAG GGCTGGCGCGGTGGCGCGATGGCGCCGGCGGTGGCCTGCAGGGCGCCGACCGCAGCGCGCTGTTCGACTATCTGCGCTGG CGCACCGAGGCGCGCTACGCGCCGCGCAGCAATGCGCGCCTGCTCTCGACCCTGCGCGGCTTCTACGCGCTGTGCCTGCG CGATGGCGTGCGCAGCGACGACCCCACCGCGCTGCTGGATCCGCCGCGCTTGCCGCGCTCGCTGCCCAAGGCCCTGACCG AGAGCCAGATCGATGCGCTGCTGGCGGCCCCGGAGATCGGCACGCCGCTGGGCCTGCGCGATCGCGCCATGCTCGAACTC ATGTATGCGGCCGGCCTGCGCGTCAGCGAGCTGGTCACGCTGCCGGCCGTGGCGATCAACCTGCGCCAGGGCGTGCTGCG GGTCACCGGCAAGGGCAGCAAGGAACGGCTGGTGCCGCTGGGCGAGGAATCCCAGCACTGGCTGGAACGTTATTTGGAGA CCGCGCGGCCCACTCTGTCCGAGCGCAAGGCGGTGCCAGCGGTGGACGGGCAGGTTCCGCTGTTCATCGACGCCGCGCGC CGGCCGCTGAGCCGCCAGCAGTTCTGGGGCCTGGTCAAACGCTATGCGGCGGTTGCCGGCATCGACCCGGACACGGTCAG CCCGCATGGCCTGCGGCACAGCTTTGCCACCCATCTGCTCAATCACGGCGCCGACCTGCGCGCGCTGCAGATGCTGTTGG GGCACAGTTCGCTCTCCACCACGCAGATCTACACGCTGGTGGCGCGCCAGCATCTGCAGACCTTGCACGCCCGGCATCAT CCGCGCGGCTGA Protein sequence : MSASSPAERRQRAQQLPPLRAEDDQAIQRFLDRLWAEQGVARQTLDSYRRDLEGLARWRDGAGGGLQGADRSALFDYLRW RTEARYAPRSNARLLSTLRGFYALCLRDGVRSDDPTALLDPPRLPRSLPKALTESQIDALLAAPEIGTPLGLRDRAMLEL MYAAGLRVSELVTLPAVAINLRQGVLRVTGKGSKERLVPLGEESQHWLERYLETARPTLSERKAVPAVDGQVPLFIDAAR RPLSRQQFWGLVKRYAAVAGIDPDTVSPHGLRHSFATHLLNHGADLRALQMLLGHSSLSTTQIYTLVARQHLQTLHARHH PRG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 3e-53 | 57 |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 3e-53 | 57 |
