Gene Information

Name : hrpE (xccb100_3084)
Accession : YP_001904489.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : type III secretion system pilus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3517983 - 3518255 bp
Length : 273 bp
Strand : +
Note : -

DNA sequence :
ATGCTAAATTTACAATCGATAGTGCCGCGATTGGGCCAGGCCAGGGATCTGCTTGGATCTGACCTTTCAAGCAGATTTGA
CAATCACACTGCCACTCAGACCTCGGACAATCAGATGGATAGTCTGATGGGTGGCATTGGTAAATCAGCCGCAGCACAGG
AGCGCATGAACAACTACCTGACCGCGAAGAAGAACGAACTTGACTTCAACGTGGCGCTCAACAAATTCATCGGCAAGGCA
GGCGACAACGCGAAGCAGCTGGTTGGCCAGTAA

Protein sequence :
MLNLQSIVPRLGQARDLLGSDLSSRFDNHTATQTSDNQMDSLMGGIGKSAAAQERMNNYLTAKKNELDFNVALNKFIGKA
GDNAKQLVGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3021 YP_244089.1 HrpE protein Virulence Hrp PAI Protein 9e-36 100
hrpE NP_636595.1 HrpE protein Virulence Hrp PAI Protein 9e-36 100
hrpE AAD21326.1 HrpE Virulence Hrp PAI Protein 2e-13 57
hrpE YP_362148.1 HrpE protein Virulence Hrp PAI Protein 2e-13 57
hrpE BAB07867.1 HrpE Virulence Hrp PAI Protein 7e-12 50
hrpE YP_198715.1 hypothetical protein Virulence Hrp PAI Protein 1e-11 50
hrpE NP_640752.1 HrpE protein Virulence Hrp PAI Protein 4e-12 50
hrpE AAP34354.1 HrpE Virulence Hrp PAI Protein 5e-11 49