Gene Information

Name : xccb100_3081 (xccb100_3081)
Accession : YP_001904486.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : HpaA protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3515885 - 3516700 bp
Length : 816 bp
Strand : +
Note : -

DNA sequence :
ATGATCCGGCGCATTTCGCCAGGCGCTGTGCCTCCGTCGCTGCCGAGCGCGCCCGTCGCATCGCACCACCACGCAGATGC
GCCGCAGGCTGGCGTGCAGCCGCCGGCGGACACGGCACATCATGCACCCCGTCTGCGCCCCGCCCCGCCGCGCAAGCGGC
GACGCGGCATGCGCTCGCTGGATGGCATGGACGACGAACTCGACGCCACCGAACTGGAAGAAGCCGAAGCGGCACGCGTC
TCGGCGCTGCGCGGCCGGGTCAGCATCGCAGTCGCTCAGCCACAGGGCCAGGGACAACGCCAGGATGATCAGCACGGCGA
GGGCGGCAACGCGCAGGCCGGCGATCCGCAGGCCGGTACGTGGCCGATCGCCGCGCCATCGCAGGTAGACGACAGCGCCC
GTGCCAGCGTCCAGGAAGTGCTCGACCGCTACGCGGCGACCCCTGCCGCCGACCAGACGATCCGGCGACGCGCGCTTGCC
GTTGCGCTGGTTGAGTTGCGTGCGATCGGTGTCGCCCATCCTGCCGCAGCACAGTTGACGACCATGGTCTGGAGGTTGAT
GCGCGAGCATCTGCACTCGGGCAGCGCAGGCGCAGCTGCCGAAACCCTGCAGGCCTTGCGCAAGCGCCTGCTGGATCTGG
TGCCGGCGCAACCGGATACATCGCCTGCACTGCGCAGTTTCCATCTGCTGCTGCCGTTGATGCTGCTCAACGCAGAAAAA
CCGCGTAAACGCCTCGATCGCGCGCGTGCCATCACGCGTTTGAACACGCTATTGATTGAACACCACGATGGGACCGCTCA
GGAGATTCGCGCATGA

Protein sequence :
MIRRISPGAVPPSLPSAPVASHHHADAPQAGVQPPADTAHHAPRLRPAPPRKRRRGMRSLDGMDDELDATELEEAEAARV
SALRGRVSIAVAQPQGQGQRQDDQHGEGGNAQAGDPQAGTWPIAAPSQVDDSARASVQEVLDRYAATPAADQTIRRRALA
VALVELRAIGVAHPAAAQLTTMVWRLMREHLHSGSAGAAAETLQALRKRLLDLVPAQPDTSPALRSFHLLLPLMLLNAEK
PRKRLDRARAITRLNTLLIEHHDGTAQEIRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3018 YP_244086.1 HpaA protein Virulence Hrp PAI Protein 6e-65 99
hpaA NP_636598.1 HpaA protein Virulence Hrp PAI Protein 6e-65 99
hpaA AAP34351.1 HpaA Virulence Hrp PAI Protein 7e-38 61
hpaA NP_640755.1 HpaA protein Virulence Hrp PAI Protein 3e-37 61
hpaA YP_198718.1 protein HpaA Virulence Hrp PAI Protein 2e-36 59
hpaA BAB07864.1 HpaA Virulence Hrp PAI Protein 1e-36 59
hpaA AAD21323.1 HpaA Virulence Hrp PAI Protein 7e-37 58
hpaA YP_362151.1 HpaA protein Virulence Hrp PAI Protein 9e-37 58