Gene Information

Name : xccb100_3078 (xccb100_3078)
Accession : YP_001904483.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : HrcQ protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1886
EC number : -
Position : 3513985 - 3514992 bp
Length : 1008 bp
Strand : +
Note : -

DNA sequence :
GTGTTGTCAACAGAGCCGAGCCTGACGTCGCCGGCACGCGACTTGTCGCAGGCGCTGACCCACGTGCCCGCCGTGCGCGC
GCAGCTGGGCAGAGTGCTCTGCGATCCGCGTGCGGCACAGCGTTGCGGCTACACCGCGCAACGCCGCGGCATTCGGGCTG
CGGATGCAGCGCGCCTGCAGCTGCAGTTCGATAGCGGCAGTCTGGAGTTGCGGATCGCGGCACGCGACGGCCTGGCGCTG
CTGTTGAACGAAGCCGATGACGCACTGCGCGTGGCGATCGCCGGTGTGCTGTTGAGCGATGATCTGCGCGCCCTGGAACC
ACTGGGACTAGGCGCTGCCGAGGTGGTCGCCTTCGAGCGCTGTGCGGATGCGGTCGATCGCCTCGATATCGGCATCACGC
TGGGCGGCATCGACGCAATCGCAGAGACCGCCAGCCCGCTGCTGCTTGCCGCGCTGCAAACGGCTAGCGCTGCGCTGGCT
CAGCCATCGCCACTGCCGGCCTGGCTGAGCGCACTGCGGGTGACTACGCGCCTGCGTATCGGCCAGCGCACGGCAACGGC
GGCGTTGCTGCAATCGCTGCGCCCGGGCGATGTCCTGTTGCACGCTCTCGCCACGGCTCCCGTGCGCAGCGGCGAGCTGC
TCTGGGGCATCCCTGGAGGTGCAGTGTTGCGCGCTCCGGTACGCCTGACCCTGCAACAGATGATTCTGGAGACTGCCCCC
ACCATGCAGCACGATATGCCCGCGTCCGACTCCTCATCGTCCGCCACCGATGTGGCGGCACTGGAACTGCCCGTACAGCT
GGAAGTGGACCAGCTTGCGCTGTCTCTATCCGTGCTGTCGGGCTTGCAGCCCGGCCAGATCCTCGAGCTGTCGGTGCCGG
TGGACCAGGCCGACATCCGCCTGGTCGTCTACGGCCAGACCATCGGCATCGGCAGATTGCTGGCGGTGGGCGAACATCTC
GGCGTGCAGATCCTCAGCATGTCGGAGACTGCGCATGCAGATGCCTGA

Protein sequence :
MLSTEPSLTSPARDLSQALTHVPAVRAQLGRVLCDPRAAQRCGYTAQRRGIRAADAARLQLQFDSGSLELRIAARDGLAL
LLNEADDALRVAIAGVLLSDDLRALEPLGLGAAEVVAFERCADAVDRLDIGITLGGIDAIAETASPLLLAALQTASAALA
QPSPLPAWLSALRVTTRLRIGQRTATAALLQSLRPGDVLLHALATAPVRSGELLWGIPGGAVLRAPVRLTLQQMILETAP
TMQHDMPASDSSSSATDVAALELPVQLEVDQLALSLSVLSGLQPGQILELSVPVDQADIRLVVYGQTIGIGRLLAVGEHL
GVQILSMSETAHADA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3015 YP_244083.1 HrcQ protein Virulence Hrp PAI Protein 3e-103 99
hrcQ NP_636601.1 HrcQ protein Virulence Hrp PAI Protein 3e-103 99
hrcQ AAD21320.1 HrcQ Virulence Hrp PAI Protein 1e-65 76
hrcQ NP_640758.1 HrcQ protein Virulence Hrp PAI Protein 6e-77 76
hrcQ AAP34348.1 HrcQ Virulence Hrp PAI Protein 4e-75 75
hrcQ YP_362154.1 HrcQ protein Virulence Hrp PAI Protein 1e-75 74
hrcQ BAB07861.1 HrcQ Virulence Hrp PAI Protein 9e-74 73
hrcQ YP_198721.1 hypothetical protein Virulence Hrp PAI Protein 2e-81 72