Gene Information

Name : xccb100_3077 (xccb100_3077)
Accession : YP_001904482.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : HpaC protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3513334 - 3513945 bp
Length : 612 bp
Strand : +
Note : -

DNA sequence :
GTGCGCATCCTGCCCATTGCCGGCGCACCGCTGCAGCCGCACGCAGCGGCAGCACCGGCGCGTGCGACGCAACGTGTCAG
CTTCATGCAACTGCGCCGACGCCTGAGCAGCGTGCTGGCCGGATTGCCGGACACGGTGGTGCCGGAGGACGGCGACGACG
ATCCGACGCTGGCCGAAGTGGTGGATGCTGCCAGCGACGATCACGGACCCGCAGCGCTGCCAACCGCACCGCCCTGCCTG
GATGACGGCAATCGTCGACAGATCGCCCGAGGCGATGACGGCGACGCACTGGGTCGGCAGATCGCCACCGAGTGGATCCG
CACCCAACGCGCGCAGCTGGCCATCAACCACATCGCGCTGCGGGTTGCCGAGTTTTGCAACGCCACGCCGGTACGCGGCG
CAGGTACCTGGGAAGCGTGGCTGGAGATCAACCACGACATCCTGCCGCAGACCACGCTGTTCTTGCGGCTTTCGCCAGAC
CAGCTATCGCTTCGCTTCGACAGCGGCTCGCCGGAGACGCGCGAGGTACTTTTGAATGGAAGAAAACGTTTGGATACTGC
ATTGAAGGCTGCGCTCAGCGACACGCTTCAGATCAGCATCGAGGTCGTCTAG

Protein sequence :
MRILPIAGAPLQPHAAAAPARATQRVSFMQLRRRLSSVLAGLPDTVVPEDGDDDPTLAEVVDAASDDHGPAALPTAPPCL
DDGNRRQIARGDDGDALGRQIATEWIRTQRAQLAINHIALRVAEFCNATPVRGAGTWEAWLEINHDILPQTTLFLRLSPD
QLSLRFDSGSPETREVLLNGRKRLDTALKAALSDTLQISIEVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaP NP_636602.1 HpaP protein Virulence Hrp PAI Protein 8e-80 99
XC_3014 YP_244082.1 HpaP protein Virulence Hrp PAI Protein 8e-80 99
hpaP AAP34347.1 HpaP Virulence Hrp PAI Protein 9e-48 59
hpaP BAB07860.1 HpaP Virulence Hrp PAI Protein 2e-49 58
hpaP NP_640759.1 HpaP protein Virulence Hrp PAI Protein 1e-47 58
hpaP YP_198722.1 hrpC3 Virulence Hrp PAI Protein 1e-48 57
hpaC YP_362155.1 HpaC protein Virulence Hrp PAI Protein 3e-48 55