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Name : hrcU (xccb100_3075) Accession : YP_001904480.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Virulence Product : type III secretion system protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 3510306 - 3511379 bp Length : 1074 bp Strand : + Note : - DNA sequence : ATGTCGGATGAGAAGACCGAGAAGCCGACAGAAAAGAAACTGCAGGATGCGCGCAGGGATGGGGAAGTCCCGATCAGCCC GGACGTCACTGCCGCCGCAGTGCTGCTGGCCGCGCTGCTGGTGATGAAGCTGGCAGGCAGCTATTTTGTCGAACATCTGC GTGCATTGATGTCGATCGGTTTCGATTTCGCCACCAATACGCGCGATGCCACCGCCTTGCACCGTGCGCTCGGTCGCATC GGCATCCAGGGTGTCTTGCTGACGCTGCCCTTCGTGACGGCCTGCCTGGCCGCAGGATTGATCGGCACCTTTGTGCAGAC CGGGCTTAATGCCTCGCTCAAACCGGTCACGCCCAAATTCGATTCGCTCAACCCCGTCAACGGCGTCAAAAAACTTTTTT CGTTACGCAGTCTCATCAACCTGCTGAAGCTGGGCATCAAGGCGGCCGTGATCGGCGTGGTGCTGTGGTACGGCCTTCGT GCACTCATGCCGACCATCATCGGGCTCGCCTACCAGCCACCGGCCGACATCGCCCAGATCGGCTGGCGCGCACTGGGCAT TTTGTGCGCCCTGGCGGTCCTGGTGTTCGTGCTGGTCGGCGCGGCGGACTGGAGCGTGCAGCATTGGTTGTTCATTCGCG ACAAGCGCATGAGCAAGGACGAGCAGAAGCGCGAACACAAGGAGAGCGAAGGCGACCCGGAAGTGAAGGGAAAGCGCAAG GAATTCGCCAAGGAACTGGTCTTCGGCGACCCGCGCGAGCGCGTTGCCAAGGCCAAGGTGATGGTGGTCAACCCGACCCA TTACGCCGTCGCGCTCGCCTACGAACCGGACGGCTTCGGTCTGCCGCAGGTGGTTGCCAAGGGCGTGGACGAGGGCGCAC TGGAACTGCGTGCCTATGCGCACAACCAGGGCATTCCGATCGTGGCGAACCCGCCGTTGGCACGTGCGCTGCATGAGGTC GAACTGGGCGAGGCGGTTCCCGAATCGCTGTTCGAAACGGTGGCGGTGGTGCTGCGCTGGGTCGATGAACTGGGCCGCGA CAACGATGAAGGCAGCGGTCCGCTGCCCTGCTAG Protein sequence : MSDEKTEKPTEKKLQDARRDGEVPISPDVTAAAVLLAALLVMKLAGSYFVEHLRALMSIGFDFATNTRDATALHRALGRI GIQGVLLTLPFVTACLAAGLIGTFVQTGLNASLKPVTPKFDSLNPVNGVKKLFSLRSLINLLKLGIKAAVIGVVLWYGLR ALMPTIIGLAYQPPADIAQIGWRALGILCALAVLVFVLVGAADWSVQHWLFIRDKRMSKDEQKREHKESEGDPEVKGKRK EFAKELVFGDPRERVAKAKVMVVNPTHYAVALAYEPDGFGLPQVVAKGVDEGALELRAYAHNQGIPIVANPPLARALHEV ELGEAVPESLFETVAVVLRWVDELGRDNDEGSGPLPC |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3012 | YP_244080.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 3e-149 | 99 |
| hrcU | NP_636604.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 3e-149 | 99 |
| hrcU | AAP34345.1 | HrcU | Virulence | Hrp PAI | Protein | 6e-127 | 83 |
| hrcU | NP_640761.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-129 | 83 |
| hrcU | BAB07858.1 | HrcU | Virulence | Hrp PAI | Protein | 8e-129 | 82 |
| hrcU | YP_362157.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-129 | 82 |
| hrcU | YP_198724.1 | type III secretion system protein HrcU | Virulence | Hrp PAI | Protein | 1e-129 | 82 |
