Gene Information

Name : hrpB4 (xccb100_3071)
Accession : YP_001904476.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : type III secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3507809 - 3508438 bp
Length : 630 bp
Strand : -
Note : -

DNA sequence : 
ATGGACAAGGCACGGATCGACAACACAGCACGGTGGCTTCAACGATGGACGGCGGCCGTGTCCACGCTGGCGCAATCGCT
GGATGCAGAGCGGGTGGCGCACTGGCTGGGTCCGGTCGCTGCGCTGGGCTGGGAACGTGCAGCGGCGCAGCGCCGTATGC
GCGTGATCCAGGCCTGGTCGGGATGGGCGAGCATGCAGGTCGGCGCACTGGATCCGCTGGCCAATCGGCTGGTCGTGCTC
GCGCCCGATCTGCTCGCCAGGGTGTTGATGAGCCGCGCGTTGTTTTCGCGCGCACTGGCGCTGCGCCGCTGTATCGAGCG
CGAGCGCCTGAGCTGGTTCGAGCAGCGGGTGGGGCCGGCGGTGCTTGACTATGTGCGCCATTGCGCAGGCACCGGCATGA
CAGCGCCGCTGTTGCCGCACGATGCCGACCAGGCGGCATGGATCGGCGATGGCTGGCGTCGAATGCAGGCCGATGGTGTC
TGGCCCGACCCCTGCATCGCCAAGGTGCTGGCGCTGTGCTTGCCGCTGGGCGCTGCCCGTGTGGTGCCCATCGCGGCAGA
TGGCGCGAGCGATGCATTCCTGCGGGCGCTGCCCACCCTGTTGCCGGAGCTGCCATGCGTCTTTGGCTGA

Protein sequence : 
MDKARIDNTARWLQRWTAAVSTLAQSLDAERVAHWLGPVAALGWERAAAQRRMRVIQAWSGWASMQVGALDPLANRLVVL
APDLLARVLMSRALFSRALALRRCIERERLSWFEQRVGPAVLDYVRHCAGTGMTAPLLPHDADQAAWIGDGWRRMQADGV
WPDPCIAKVLALCLPLGAARVVPIAADGASDAFLRALPTLLPELPCVFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3008 YP_244076.1 HrpB4 protein Virulence Hrp PAI Protein 9e-83 100
hrpB4 NP_636608.1 HrpB4 protein Virulence Hrp PAI Protein 9e-83 100
hrpB4 AAP34341.1 HrpB4 Virulence Hrp PAI Protein 1e-53 70
hrpB4 NP_640765.1 HrpB4 protein Virulence Hrp PAI Protein 2e-53 70
hrpB4 AAB08459.1 HrpB4 Virulence Hrp PAI Protein 5e-55 69
hrpB4 YP_362161.1 HrpB4 protein Virulence Hrp PAI Protein 7e-55 69
hrpB4 AAF61283.1 HrpB4 Virulence Hrp PAI Protein 1e-51 68
hrpB4 BAB07854.1 HrpB4 Virulence Hrp PAI Protein 1e-54 68
hrpB4 YP_198728.1 protein HrpB4 Virulence Hrp PAI Protein 2e-54 68