Gene Information

Name : hrcT (xccb100_3067)
Accession : YP_001904472.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : HrcT protein
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 3504476 - 3505306 bp
Length : 831 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGACACCGCCACCGCGCTGCTGGCGCTGTCATCCCAGGGCGTGTCGCTGCTGACCCTGCTGGCGCTGTGCGGTGT
GCGCGTGTTCGTGTTGTTCTTCGTGCTGCCGGCAACCGCGCAGGACAGTCTTCCCGGAATGACGCGCAACGGCGTGATCT
ATGTGCTGAGTTCGTTCATCGCCTACGGACAACCGGCCGATGCGCTGGCCAGGATCGAAGCGGCCGGCCTGGTGGGGCTG
GTGTTCAAGGAAGCTTTTATCGGCCTGCTGATCGGGTTTGCCGCATCTACGGTGTTCTGGGTTGCCGAAAGTGTGGGCCT
GCTCATCGACGATGTGTCCGGCTACAACAACGTGCAGATGATCAACCCGTTGAGCGGTGAGCAGAGCACGCCGGTCTCCA
CCGTGTTGATGCAGTTGGCGATCGTGTCGTTCTACGCGCTGGGCGGCATGCTGATGCTGCTCGGCGCGCTGTTCGAATCG
TTTCGCTGGTGGCCGCTGAGCCAGCTCATGCCGGACATGGGAGCGATCGGCGAGTCGTTCGTCATCCAGCAGACCGACGG
CATGATGGCCGCCATCGTCAAGCTGTCCGCACCAGTGATGTTGGTGCTGGTGCTGGTGGATCTGGCCATCGGCTTTGTGG
CGCGCGCCGCCGACAAGCTGGACCCCTCCAATCTGAGTCAACCGATCCGTGGGGTGCTGGCGCTGCTGCTGCTGGCCTTG
CTGACCAGCGTGTTCATTGCGCAATCCGGTGACGCACTCGGCTTCCTCCACTTCCAGCAGCAGTTGCACGATGCCGCCAA
CGCAAGTGCAAAAGGAGGCGCATCGCACTGA

Protein sequence :
MSDTATALLALSSQGVSLLTLLALCGVRVFVLFFVLPATAQDSLPGMTRNGVIYVLSSFIAYGQPADALARIEAAGLVGL
VFKEAFIGLLIGFAASTVFWVAESVGLLIDDVSGYNNVQMINPLSGEQSTPVSTVLMQLAIVSFYALGGMLMLLGALFES
FRWWPLSQLMPDMGAIGESFVIQQTDGMMAAIVKLSAPVMLVLVLVDLAIGFVARAADKLDPSNLSQPIRGVLALLLLAL
LTSVFIAQSGDALGFLHFQQQLHDAANASAKGGASH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3004 YP_244072.1 HrpB8 protein Virulence Hrp PAI Protein 9e-105 100
hrcT NP_636612.1 HrpB8 protein Virulence Hrp PAI Protein 9e-105 100
hrpB8 AAB08463.1 HrpB8 Virulence Hrp PAI Protein 4e-95 88
hrcT YP_362165.1 HrcT protein Virulence Hrp PAI Protein 5e-95 88
hrpB8 BAB07850.1 HrpB8 Virulence Hrp PAI Protein 2e-93 87
hrpB8 AAF61279.1 HrpB8 Virulence Hrp PAI Protein 2e-93 87
hrcT AAP34337.1 HrcT Virulence Hrp PAI Protein 5e-94 87
hrpB8 YP_198732.1 protein HrpB8 Virulence Hrp PAI Protein 2e-93 87
hrcT NP_640769.1 HrcT protein Virulence Hrp PAI Protein 7e-94 87