Gene Information

Name : hrcC (xccb100_3066)
Accession : YP_001904471.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : HrcC protein
Function : -
COG functional category : N : Cell motility
COG ID : COG1450
EC number : -
Position : 3502482 - 3504299 bp
Length : 1818 bp
Strand : -
Note : -

DNA sequence :
ATGGCATACGCCTGTCCTCCAGTTCACCGCCATCGACGCGCGCCGTTGGCCGCTGCCTTGTTGCTTGGCTTGCTGCCGCT
GCTGCCGCCGCATGCCAACGCCGCGTCGGTGCCGTGGCACTCGCGCAGCTTCAAATACGTTGCCGACCGCAAGGATCTCA
AGGAGGTGCTGCGCGACCTGTCCGCCAGCCAATCCATCACCACCTGGATTTCACCGGAGGTGACCGGCACGCTCAGTGGC
AAATTCGAAGCCACTCCGCAGAAGTTTCTCGACGATCTATCGGGCACGTTCGGTTTTGTCTGGTATTACGATGGCTCGGT
GCTCAGAATCTGGGGCGCGAACGAGACCAAGAATGCGACCTTGAGTTTGGGCGCTGCATCGACGAGTGCGCTGCGCGATG
CGCTTGCGCGCATGCGGCTGGACGATCCGCGCTTTCCGGTCCGTTATGACGAGACAGCGCACCTGGCGGTGGTGTCGGGC
CCGCCGGGTTATGTGGATACCGTCGCGGCGATCGCCAAGCAGGTCGAGCAGGTCGCGCGCCAACGCGACGCCACCGAAGT
GCAGGTGTTTCAGCTGCATTATGCGCAGGCGGCCGACCACACCACCCGCATCGGTGGTCAAGACATCCAGGTGCCGGGCA
TGGCCAGCCTGTTGCGCAACATATACGGCGTGCGTGGCGCGCCCACTGCGGCGCTGCCCGGGCCAGGCGCGAATTTCGGG
CGTGTGCAACCGATCGGCGGTGGCTCGTCCAATACCTTCGGCAACAGCGGTCAGCGCCAGAGTGGCGGCAGCGGCATTCT
CGGTTTGCCTGCGTCGTGGTTCGGCGCTGGGTCGCCGTCCGAGCGGGTGCCGGTCAGTCCGCCGTTGCCGGGCAGTGGCA
ATAGCGCCAATGCGCCGGCCAGCGTGTGGCCGGAGATGAGCCAGGCCAGACGCGATGCGCCGCTGGCGGTGGACGCCGGC
AGCGGCGGTGAGCTGGCATCCGACGCGCCGGTGATCGAAGCCGACCCGCGCACCAACGGCATTCTCATTCGCGACCGCCC
CGAGCGGATGGCCGCCTATGGCACGTTGATCCAGCAGCTCGACAACCGTCCCAAGCTGCTGCAGATCGATGCCACCATCA
TCGAGATCCGCGACGGCGCCCTGCAGGATCTCGGCGTGGACTGGCGGTTCCACAGCCGGCGTGTGGATGTGCAGACCGGC
GACGGGCGTGGTGGCCAGCTTGGCTACGATGGCAGCTTGAGCGGTGCAGCAGCCGCCGGTGCAGCCGCGCCGTTGGGCGG
GACGTTGACCGCTGTCCTGGGCGATGCAGGGCGTTACCTGATGACGCGCGTCTCGGCGCTCGAGCAGACCAACAAGGCCA
AGATCGTCTCCACCCCGCAGGTGGCGACGCTGGACAACGTGGAAGCGGTGATGGACCACAAGCAACAGGCATTCGTGCGT
GTCAGCGGTTATGCATCCGCCGACCTCTACAACCTGTCCGCGGGTGTATCGCTACGCGTATTGCCAAGTGTGGTGCCGGG
GTCGCCAAATGGTCAGATGCGCCTGGATGTGCGTATCGAAGACGGGCAGTTGGGCGCCAATACCGTCGATGGCATTCCCG
TCATCACCTCCAGCGAGATCACCACGCAGGCCTTCGTCAACGAGGGCCAGAGCCTGCTGATCGCCGGTTATGCTTCCGAC
ACCGATCAGACAGATCTGAACAACGTCCCCGGGCTGTCCAGGATTCCATTGGTCGGCAACCTGTTCAAGCATCGCCAGCA
GAGCGGGTCGCGGTTGCAGCGGTTGTTCCTGCTGACCCCGCATATCGTCTCGCCCTGA

Protein sequence :
MAYACPPVHRHRRAPLAAALLLGLLPLLPPHANAASVPWHSRSFKYVADRKDLKEVLRDLSASQSITTWISPEVTGTLSG
KFEATPQKFLDDLSGTFGFVWYYDGSVLRIWGANETKNATLSLGAASTSALRDALARMRLDDPRFPVRYDETAHLAVVSG
PPGYVDTVAAIAKQVEQVARQRDATEVQVFQLHYAQAADHTTRIGGQDIQVPGMASLLRNIYGVRGAPTAALPGPGANFG
RVQPIGGGSSNTFGNSGQRQSGGSGILGLPASWFGAGSPSERVPVSPPLPGSGNSANAPASVWPEMSQARRDAPLAVDAG
SGGELASDAPVIEADPRTNGILIRDRPERMAAYGTLIQQLDNRPKLLQIDATIIEIRDGALQDLGVDWRFHSRRVDVQTG
DGRGGQLGYDGSLSGAAAAGAAAPLGGTLTAVLGDAGRYLMTRVSALEQTNKAKIVSTPQVATLDNVEAVMDHKQQAFVR
VSGYASADLYNLSAGVSLRVLPSVVPGSPNGQMRLDVRIEDGQLGANTVDGIPVITSSEITTQAFVNEGQSLLIAGYASD
TDQTDLNNVPGLSRIPLVGNLFKHRQQSGSRLQRLFLLTPHIVSP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
XC_3003 YP_244071.1 HrcC protein Virulence Hrp PAI Protein 0.0 100
hrcC NP_636613.1 HrcC protein Virulence Hrp PAI Protein 0.0 100
hrcC NP_640770.1 HrcC protein Virulence Hrp PAI Protein 0.0 86
hrcC AAP34336.1 HrcC Virulence Hrp PAI Protein 0.0 85
hrcC YP_362166.1 HrcC protein Virulence Hrp PAI Protein 0.0 85
hrpA1 AAB08464.1 HrpA1 Virulence Hrp PAI Protein 0.0 85
hrpA BAB07849.1 HrpA Virulence Hrp PAI Protein 0.0 84
hrpA AAC95122.2 HrpA Virulence Hrp PAI Protein 0.0 84
hrcC YP_198733.1 hypothetical protein Virulence Hrp PAI Protein 0.0 84