Gene Information

Name : xccb100_3055 (xccb100_3055)
Accession : YP_001904460.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : ISxcc1 transposase ORFB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3492630 - 3493397 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
GTGGTTGGCGTGGCTCGCTCGACAGCACGTTATCGGCGCCGTCCCGATCGGGATGAGGAGGTTATTGCGCTGTTGTCCGA
GTTGGCCGAGCGTTTTCCCGAGCGCGGATTTGGAAAGCTTTTTCAGATCATCCGTCGTCGCGGACATCTGTGGAATCACA
AGAGGGTCTGGCGCGTGTACTGCCTGATGAAACTCAATCAACGTCGCCGCAGCAAGCGCCGGGTACCGACGCGTCATCCA
CAGCCGCTGGCATGCGGTGATCGACCCAACGCTGGATGGTCGATCGATTTCATGTCTGATGCGCTATGGGATGGTCGACG
GTTCCGCACGTTCAATATCATCGACGATTTCAGTCGGGAAGCCTTGGCCATCGATGTGGACCTGAATCTTCCGGCTGCCC
GCGTCATCCGCACGTTGGAACGTATCGCAGCTTGGCGCGGCTATCCGAACAAGCTGCGTTTGGACAATGGCCCGGAATTT
GTTGCATTGGCCTTGGCCGAGTGGGCTGAGCGCAAGGGTATCGCGTTGGATTTCATCGAGCCGGGGCGTCCGATGCAGAA
CGGTTTTATCGAACGCTTCAACGGCAGCTACCGGCGTGGCGTATTGGATATGCACATATTCCGCACGCTGAGCGAGGTCC
GCGAACAGACCGAACAGTGGCTGGCCGACTACAACCAACAAATACCGCACGACAGCCTGGGCGGGCTAACGCCCGCCGAG
TTCCGTGAGCAACATCAACCGCAGACCTCTAGCTTTATCTGGCATTGA

Protein sequence :
MVGVARSTARYRRRPDRDEEVIALLSELAERFPERGFGKLFQIIRRRGHLWNHKRVWRVYCLMKLNQRRRSKRRVPTRHP
QPLACGDRPNAGWSIDFMSDALWDGRRFRTFNIIDDFSREALAIDVDLNLPAARVIRTLERIAAWRGYPNKLRLDNGPEF
VALALAEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHIFRTLSEVREQTEQWLADYNQQIPHDSLGGLTPAE
FREQHQPQTSSFIWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 8e-72 58
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 1e-36 44
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 1e-41 42