Gene Information

Name : xccb100_2833 (xccb100_2833)
Accession : YP_001904238.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : ISXcc1 transposase ORFB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3251440 - 3252198 bp
Length : 759 bp
Strand : -
Note : -

DNA sequence :
GTGGCGCGCTCGACAGCACGCTATCGGCGTCGTCCCGATCGGGATGAGGAGGTCATTGCGCTGTTGTCCGAATTGGCCGA
ACGCTTTCCCGAGCGTGGTTTTGGAAAGCTCTTTCAGATCATCCGCCGTCGCGGACATGTGTGGAATCACAAAAGGGTGT
GGCGCGTGTATTGCCTGATGAAGCTCAATCAACGTCGTCGCAGCAGGCGCCGGGTTCCGGCCCGTCATCCACAACCGTTG
GCATGCGGAGCACACCCCAATGCCGGATGGTCGATCGACTTCATGTCCGATGCGTTGTGGGATGGTCGACGCTTCCGCAC
GTTCAATGTCATCGACGATTTCAGTCGGGAAGCCTTGGCGATCGAAGTGGACTTGAATCTTCCGGCCGCCCGCGTCATCC
GCACCTTGGAGCGCATCGCAGCCTGGCGCGGCTACCCCGGCAAACTTCGCCTGGACAATGGCCCGGAGTTTGTCGCGTTG
GCCTTGGCCGAGTGGGCCGAGCGCAAAGGCATCGCATTGGATTTCATCGAGCCGGGACGGCCGATGCAAAACGGTTTTAT
TGAACGCTTCAACGGCAGCTACCGGCGCGGCGTGCTGGACATGCACATCTTCCGCACGCTGAGCGAGGTCCGCGAACAGA
CCGAACACTGGCTGGCCGACTACAACCAGCAGATCCCACACGACAGCCTGGGCGGGCTAACGCCCGCCGAGTTCCGTGAT
CAACATCAACCGCAGACCTCTAGTTTTGGCTGGCATTGA

Protein sequence :
MARSTARYRRRPDRDEEVIALLSELAERFPERGFGKLFQIIRRRGHVWNHKRVWRVYCLMKLNQRRRSRRRVPARHPQPL
ACGAHPNAGWSIDFMSDALWDGRRFRTFNVIDDFSREALAIEVDLNLPAARVIRTLERIAAWRGYPGKLRLDNGPEFVAL
ALAEWAERKGIALDFIEPGRPMQNGFIERFNGSYRRGVLDMHIFRTLSEVREQTEHWLADYNQQIPHDSLGGLTPAEFRD
QHQPQTSSFGWH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1400B CAB46580.1 IS1400 transposase B Not tested HPI Protein 1e-68 61
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 6e-34 45
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 7e-38 43