Gene Information

Name : xccb100_2824 (xccb100_2824)
Accession : YP_001904229.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : IS1477 transposase ORFB
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 3242934 - 3243767 bp
Length : 834 bp
Strand : +
Note : -

DNA sequence :
ATGTGCGAGCTGACGTCGATCAGCGAGCGCCGGGCTTGTCGCCTTGCGGGGATCTCCCGCGATGCTTTCCGCCACGCGCC
GACACCCACGCCGGCGACGCAAACCCTGTCGGCCAGACTGGTGGAACTGGCGCAGGCGCGTCGCCGCTTCGGCTATCGCC
GCCTGCACGACCTGCTGCGCCCGGAGTTTCCGCAGGTGAACCATAAGAAGATCTACCGTCTGTACCGCGAGGCGAAGCTG
AGCGTGCGCCGGCGCAAGAAGGCCAAGTTCCCGGCGGCACAGCGGCAGCCGTTACGGCCAGCGCGGCATCCCAACGAGGT
AATCAGCATGGACTTCGTCTTTGATCAGTTGGCCAGTGGCCGCCGCATCAAATGCCTGACCGTCGCCGACGACTTCACCC
ATGAATGCGTGGACATCGCGGTGGACCATGGCATCAGCGGGGCTTACGTGGTGCGTGTGCTGGAGCAGATCGCCTGCTTC
CGCGGCTATCCCCGCGCGGTGCGCACGGACAACGGCCCGGAGTTCACCAGCCGCGCCTTCATCGCTTGGGCACAGCAGCG
TGGCATCGAACACATCCTGATCGAACCCGGCAAACCCATGCAGAACGGCCACATCGAGAGCTTCAACGGCAAGTTCCGCG
ACGAATGTCTCAACGAACACTGGTTCACGTCGCTGATCCAGGCTCGCGAGGTCATCGCCGATTGGCGGCGTGACTTCAAC
GAGGTACGTCCGCACAGCAGCTGTGGTCGCATCCCGCCAGCGCAGTTTGCCTCCAACCACCGAGCACAAACCGGCAACAA
CGCAGTACCCTTCAACCCCGGGCTTTATCAGTAA

Protein sequence :
MCELTSISERRACRLAGISRDAFRHAPTPTPATQTLSARLVELAQARRRFGYRRLHDLLRPEFPQVNHKKIYRLYREAKL
SVRRRKKAKFPAAQRQPLRPARHPNEVISMDFVFDQLASGRRIKCLTVADDFTHECVDIAVDHGISGAYVVRVLEQIACF
RGYPRAVRTDNGPEFTSRAFIAWAQQRGIEHILIEPGKPMQNGHIESFNGKFRDECLNEHWFTSLIQAREVIADWRRDFN
EVRPHSSCGRIPPAQFASNHRAQTGNNAVPFNPGLYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 3e-57 63
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 2e-74 62
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 2e-44 59