Gene Information

Name : xccb100_2464 (xccb100_2464)
Accession : YP_001903869.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3481
EC number : -
Position : 2856463 - 2858391 bp
Length : 1929 bp
Strand : +
Note : -

DNA sequence :
ATGCTCTCCCTGTTCCAGCGAAAAAGGGCTTCGGTCGCTGCCGCTGCGTCGCCAGGACCCACCACCGACCTCCCGAAAGG
GCTGACGCGGCCGGAGACGGCCGCGTCCTTGCTCGCCACCCCGCGCCGTCAGAAGCTGCTGGAACACATTTGGCAGCGCA
CGTCGCTGTCTCGCCAGCAGTTCGACACGCTGTACCGCACGCCCTTGGAGCGCTACGCCGCGCTTGTGCAGCAATTTCCC
GCCTCAGAGAGCCACCACCATGCCTACCACGGCGGCATGCTCGACCATGGTCTTGAAATCGTTGCCTACGCGCTCAAGCT
GCGGCAGTCCTATCTGCTGCCCGCTGGCGCAACACCCGAAGACCAGGCCGCACAAGCCGAAGCCTGGACCGCCGCCACCG
CCTACGCCGCCCTGCTTCACGACATCGGCAAGATCGCTGTTGATCTGCATGTCGAGCAGGCCGACGGCAGTGTCTGGCAC
CCCTGGCATGGCCCGCTGAAGCAACCCTACCGATTCCGCTATCGAGAGGATCGCGAGTACCGCCTGCACAGTGCAGCTAC
CGGCCTGCTGTACCACCAGGTGATCGATCGCTTCATCCTTGACTGGCTCAGCGGCTTCCCATCGCTGTGGGCGGCGCTGC
TGTACATCATGGCAGGACAGTATGAGCATGCCGGGGTGCTCGGGGAACTGGTGATCAAGGCCGACCGTGCGTCCGTCGCC
CAAGAACTGGGAGGAGATCCGGCAAAGGCGATGGCCGCACCGAAGCATGCTCTGCAGCGCAAGCTGCTTGACGGCCTGCG
CTATCTGCTCAAGGAAGAGTTGAAACTAAATCAGCCCCAGGCGTCCGATGGCTGGCTGACGCACGATGCGCTCTGGCTCG
TCAGCAAGACCGTCTCGGACAAGCTGCGTGCCCACCTGTTATCGCAAGGCATAGACGGCATCCCAGCGAACAATTCGGCT
GTGTTCAACGTTCTTCAAGAGCACAGCATGCTCCAGCCCGCACCGGACGGTAAAGCGATCTGGCGTGCAACCGTGACCAG
CTCAAGCGGCTGGTCACATGCCTTTACGTTACTGCGGCTCTCGCCCGCTCTGATCTGGGAGGCTGGTGAGCGGCCGGCCG
CCTACGCGGGTACGGTGCTTGTTGAAACAGGCCAAGGTGCCGAGGCAAACGGCGAGAGTGCGCCGGACTTGCTTGACTCT
TCCATGCAGGACACCGCCGATGATCGAGCCAATCCGCCGTTGGAATCGAAGCCTTCTTTGAGCACACAACCCGTAGCGAA
AAACGCGCCGGACATGATGGATGAACTGCTGGCAATGATTGGGGCGCCAGATCCACCTAAGGCCGTTGACCAAGGAAATT
CGTCGTCTCAGCCAACGCCTGAAGCTCCCGGAAAGCCGCACCAGGTGAGCGAGTTCGTCCCAGCGAAAATAAATCCAATA
TCGACTAGCAACCACCCATCTAGGGATGAGTCGAATGGCATCTCAACTCAAATGTCAGCTGATCATTTTGTGACATGGCT
GCAGCAGGCGATTGCATCGCGCCGACTCGTCATCAACGACGCTAAGGCGCTGGTGCATATCGTGGCGGATGCCGTCTATC
TGGTGAGCCCAGGTGTGTTTCAGCGCTATGCGCAAGAACATCCTCAAATCGCTGACTATGCCAAGCGTGAAGAGATGGCA
GATTGGCAGTGGGCGCAAAAGAGATTTGAGAAATTGCACCTACATCGTAAGCAAGCCAATGGCCTGAACATTTGGATGTG
CGAAGTAACCGGACCTCGCAAATCGCGCCGGCTCCACGGCTATCTGCTTGAGCGTTGGCAGGGTGTATTTGGCGAGCTTC
CGCCAAACAACCCTTACCTGAAACTTCGGGAAGTTGCTTCAGACGCCACGATAGAAGCGGATTATCATCCGCGCGCAACG
CATAACTGA

Protein sequence :
MLSLFQRKRASVAAAASPGPTTDLPKGLTRPETAASLLATPRRQKLLEHIWQRTSLSRQQFDTLYRTPLERYAALVQQFP
ASESHHHAYHGGMLDHGLEIVAYALKLRQSYLLPAGATPEDQAAQAEAWTAATAYAALLHDIGKIAVDLHVEQADGSVWH
PWHGPLKQPYRFRYREDREYRLHSAATGLLYHQVIDRFILDWLSGFPSLWAALLYIMAGQYEHAGVLGELVIKADRASVA
QELGGDPAKAMAAPKHALQRKLLDGLRYLLKEELKLNQPQASDGWLTHDALWLVSKTVSDKLRAHLLSQGIDGIPANNSA
VFNVLQEHSMLQPAPDGKAIWRATVTSSSGWSHAFTLLRLSPALIWEAGERPAAYAGTVLVETGQGAEANGESAPDLLDS
SMQDTADDRANPPLESKPSLSTQPVAKNAPDMMDELLAMIGAPDPPKAVDQGNSSSQPTPEAPGKPHQVSEFVPAKINPI
STSNHPSRDESNGISTQMSADHFVTWLQQAIASRRLVINDAKALVHIVADAVYLVSPGVFQRYAQEHPQIADYAKREEMA
DWQWAQKRFEKLHLHRKQANGLNIWMCEVTGPRKSRRLHGYLLERWQGVFGELPPNNPYLKLREVASDATIEADYHPRAT
HN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C36 AAN62129.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 70
ORF SG44 AAN62266.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 0.0 68
RL003 AAP84130.1 pathogenesis-related protein Not tested PAPI-1 Protein 1e-141 51
pph99 CAI36140.1 predicted HD-superfamily hydrolase Not tested PPHGI-1 Protein 1e-125 50
unnamed ABR13343.1 hypothetical protein Not tested PAGI-5 Protein 9e-142 50
EXA2 ABD94612.1 conserved hypothetical protein Not tested ExoU island A Protein 8e-141 50