Gene Information

Name : xccb100_2449 (xccb100_2449)
Accession : YP_001903854.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2842467 - 2843393 bp
Length : 927 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCACCCTGTACTCGCGCTGCTGGGACTGCTGGCCGTGGCCTCGGCTCCCGTCGCCCAGGCCTTGGAGGTTATGCG
CTGGGAACGCATGCCGCTTGCGGTGGCGCTGAAGGTCGGCCAGGAACGCATCGTGTTTATCGACCGGAACGTCCGCGTGG
GCATGCCTGCGGGTGTGGGCGAGCGCCTGCGCGTGCAGAGCGCGGGCGGCGCGGTGTATCTGCGCGCGAACGAGCCGATC
GAACCCACGCGGCTGCAACTACAAGACACCGACACCGGGGCATTGATCCTGCTGGACATTGCTGCCGAGCCGGCCAAGGG
TGGCGAGCCTGCGCTGGAGCCGGTGCGAATCGTCGAGGGCGATGTGCCCTCCGCGCGCTACGGCGATCAGCCGGCCGATG
CAGACGAAGTGCCAGCACCGGCCAATCGCCAGGCGACCGCGCAGTCAGCCCGGCGCGAAACGCCAATCTCGGTAGTCCTT
ACACGCTTTGCCGCGCAGAACCTATACGCACCGCTGCGCACGGTCGAGCCGCTGCCGGGCGTCATGCGGGTCAACCTGCG
CCGTGACCTGGACCTCGGCACCTTGATTCCGACACTGCCGGTGCGCGCCACCGCACTCGCCTCGTGGCGGCTGGAAGACC
AATGGGTGACGGCCGTGCGCCTCACCAACACCGACGCCGGCTGGATCACGCTAGACCCGCGCGTGCTGCAAGGCGATTTC
CTCACTGCCACCTTCCAGCATGAGGCACTCGGCCCGCGCGGCACGCCCGAGGACACCACCGTCCTGTACCTGGTGACGCG
CGGGCGAGGCATCACGCAGTCGCTTTTGCCCGCCCTCCACCGCTTCGACCCGGCCACGCATTTGCCGCAGCCGGAAGCCA
GCGTCGAGGATCCGAAGGACGGCAAGGAGGCTCCCCATGCGCAGTAA

Protein sequence :
MKHPVLALLGLLAVASAPVAQALEVMRWERMPLAVALKVGQERIVFIDRNVRVGMPAGVGERLRVQSAGGAVYLRANEPI
EPTRLQLQDTDTGALILLDIAAEPAKGGEPALEPVRIVEGDVPSARYGDQPADADEVPAPANRQATAQSARRETPISVVL
TRFAAQNLYAPLRTVEPLPGVMRVNLRRDLDLGTLIPTLPVRATALASWRLEDQWVTAVRLTNTDAGWITLDPRVLQGDF
LTATFQHEALGPRGTPEDTTVLYLVTRGRGITQSLLPALHRFDPATHLPQPEASVEDPKDGKEAPHAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-109 83
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-71 63
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 8e-76 58
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 5e-71 56
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 1e-70 56
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 5e-71 56
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 3e-53 51
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 3e-53 51
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 7e-55 50
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 3e-54 50
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 8e-55 50
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 2e-55 49
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 4e-50 46