|
Name : xccb100_2440 (xccb100_2440) Accession : YP_001903845.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Unknown Product : lytic transglycosylase Function : - COG functional category : - COG ID : - EC number : - Position : 2836212 - 2836793 bp Length : 582 bp Strand : + Note : - DNA sequence : ATGCCCGTCTTGCCGCACCTGCGTGCAGTGGTGCTAGCTGCGGGCCTGTACGCCTGCGCCGCCCAGGCCCAGGAGATCCC GCCGCCGGCCTACCAGCTTGCCGCGCAGAGCGCCGGCATTCCTTCGTCGGTGCTCTACGCCGTGGCCTTGCAGGAGAGCG GCATCCGGCGCCACAGGCGCGTCGTCCCATGGCCGTGGTCCCTCAACATCGCCGGCCAATCGCGCCGCTATGCGACCCGC GCCGACGCCTGCGCCGGTTTGCAGCAAGCCATGCGCTCCACGCCGCACACGCGCATCGACGCGGGCCTGGGCCAGATTAA CCTCGGCTACCACCAGCAGCGCTACGCCAGCGCGTGCGACTTGCTCGACCCGTACCGCAATCTCGCCATCGCCGCCGAGA TCCTGCAAGAGCAGCACACCCCCGGCGAAAACTGGCTGGTGGCGATCGGCCGCTACCACCGCCCCGCCGGTGGCGAGCCC GCAGCCCGCTATCGGCGCAGCGTGTCCCGCCACCTCGCGCGCGTGCAGGGCACGCGCCCAACCGCCGCAGTCCTCGCCGC GTGGCAGGAGACCTCCCCATGA Protein sequence : MPVLPHLRAVVLAAGLYACAAQAQEIPPPAYQLAAQSAGIPSSVLYAVALQESGIRRHRRVVPWPWSLNIAGQSRRYATR ADACAGLQQAMRSTPHTRIDAGLGQINLGYHQQRYASACDLLDPYRNLAIAAEILQEQHTPGENWLVAIGRYHRPAGGEP AARYRRSVSRHLARVQGTRPTAAVLAAWQETSP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C67 | AAN62161.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 1e-69 | 89 |
| ORF SG70 | AAN62292.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 1e-55 | 78 |
| pph70 | CAI36111.1 | soluble lytic murein transglycosylase | Not tested | PPHGI-1 | Protein | 4e-42 | 56 |
| unnamed | ABR13378.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 2e-30 | 50 |
| RL050 | AAP84175.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 2e-30 | 50 |
| EXA50 | ABD94659.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 8e-34 | 50 |
| PMI2591 | YP_002152310.1 | lytic transglycosylase | Not tested | Not named | Protein | 2e-23 | 43 |
| YE3494A | YP_001007653.1 | hypothetical protein | Not tested | YAPI | Protein | 2e-20 | 41 |
| STY4559 | NP_458645.1 | hypothetical protein | Not tested | SPI-7 | Protein | 4e-23 | 41 |
| t4257 | NP_807855.1 | hypothetical protein | Not tested | SPI-7 | Protein | 4e-23 | 41 |
