Gene Information

Name : xccb100_2439 (xccb100_2439)
Accession : YP_001903844.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2835484 - 2836206 bp
Length : 723 bp
Strand : +
Note : -

DNA sequence :
ATGAAGCCGTCGATCATCCTTCTCGCGCTCCTACTGGCATCCGCCCAGTTGCCCGCCTGGGCGCAGCAGCCGGCCACCGC
CCCGACCCGCAATGCGCAGAGCCAGGAGCGTCCGCTGGTCGCTCGAACCCCGGACGACAAGGTAGCAAGCGACTGGGGCC
TGCAACCGCAGGAATGGGCGCGCTACCGCGAGCTGATGGAGGGACCACTCGGCATCTACTCACCGAACCTGGACCCGCTA
TCGGCCTTGGGAATCGAGGCCCGCACCGACGAAGAGCGGCGGCGCTACGCGGAATTGCAGGTGCAGGTCGAAGCGCGTCG
AGTGGAGAAGCTTCTGGCATACCAGCGCGCCTACGACGAAGCCTGGCAGCGGCTGAACCCTGGCATGCAGCGCGTGAACC
TGCCCGATGACAAACCAGGCGCCGCCGTGCGCAGCAGCGGCCGCATGGCAGTATTCATTAAGGACGGCTGCGCCGCATGC
GGGCAGCTCGTGCAACGCCTGCAAACTTCGGGCACCGAGTTCGATCTGTACATGGTCGGCAGCCGCCAGGACGACGCGCG
AATCCGCGACTGGGCCAAGCGCGCGCAGATCGATCCGGCAAGAGTGCGCAGCGGCAGCATCACGCTCAACCACGACGGCG
GCCGCTGGCTGTCACTGGGCCTGACCGGTGATCTGCCGGCCGCCGCGCGCGAGGTGAACGGTCAATGGCAGCGTCAGCCG
TAG

Protein sequence :
MKPSIILLALLLASAQLPAWAQQPATAPTRNAQSQERPLVARTPDDKVASDWGLQPQEWARYRELMEGPLGIYSPNLDPL
SALGIEARTDEERRRYAELQVQVEARRVEKLLAYQRAYDEAWQRLNPGMQRVNLPDDKPGAAVRSSGRMAVFIKDGCAAC
GQLVQRLQTSGTEFDLYMVGSRQDDARIRDWAKRAQIDPARVRSGSITLNHDGGRWLSLGLTGDLPAAAREVNGQWQRQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C68 AAN62162.1 hypothetical protein Not tested PAGI-2(C) Protein 2e-89 90
ORF SG71 AAN62293.1 hypothetical protein Not tested PAGI-3(SG) Protein 2e-61 62
RL051 AAP84177.1 conserved hypothetical protein Not tested PAPI-1 Protein 6e-54 57
pph69 CAI36110.1 hypothetical protein Not tested PPHGI-1 Protein 9e-56 57
unnamed ABR13379.1 hypothetical protein Not tested PAGI-5 Protein 3e-54 56
EXA51 ABD94660.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-55 56
PMI2592 YP_002152311.1 hypothetical protein Not tested Not named Protein 7e-31 45
Pmu_03220 YP_005176221.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 9e-29 42
YE3495 YP_001007654.1 hypothetical protein Not tested YAPI Protein 2e-29 41