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Name : xccb100_2422 (xccb100_2422) Accession : YP_001903827.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Unknown Product : ISXac3 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 2817380 - 2818204 bp Length : 825 bp Strand : - Note : - DNA sequence : ATGCAAGCCCACTGCGGGGAATTCAGGGTGTGTGCAATGTGCCGGGTATTGCGGGTCAACCGGTCGGGTTATTACGCCTG GTTGTGCTCGCCCAACAGTGAGCGCGCCAAGGAAGATGATCGCTTGCTTGGACTAATCAAGCACCACTGGCTGGCCAGCG GCAGTGTCTATGGGCATCGCAAGATCACCACGGATCTGCGCGATCTGGGTGAGCGTTGTAGTCGTCATCGGGTGCATCGG CTGATGCGCACCGAGGGACTGCGTGCCCAGGTGGGCTATGGTCGCAAACCGCGCTTCCATGGAGGAATGCAGTGCAAGGC GGCGGCCAACCTGCTTGACCGACAGTTCGACGTGACGGAGCCGGACACGGCCTGGGCGAGCGATTTCACCTTCATCCGCA CGCATGAAGGCTGGATGTATTTGGCTGTTGTGATCGATCTGTTTTCCAGGCAGGTCGTCGGCTGGGCGATGCGCGATCGG GCCGACACCGAGTTGGTCGTGCAGGCGGTGTTGTCTGCGGTGTGGCGGCGCAAACCCAACGCTGGTTGCTTGGTTCATTC GGACCAAGGGTCTGTCTACACCAGCGATGACTGGCGCAGTTTCCTGGCGTCCCATGGCTTGGTGTGCAGCATGAGTCGGC GTGGCAACTGCCACGACAACGCACCCGTGGAGAGCTTCTTCGGCCTGCTCAAACGCGAGCGGATCAGGCGGCTGACCTAT CCCACCAAGGACGCCGTGATACGCCCAGGGTTTCCTAGACATCTCAAGGCCATGGAAAATGGTCGATTCGGAGGTGTCTA TGAGCAGCAAGCGGTATACGGATGA Protein sequence : MQAHCGEFRVCAMCRVLRVNRSGYYAWLCSPNSERAKEDDRLLGLIKHHWLASGSVYGHRKITTDLRDLGERCSRHRVHR LMRTEGLRAQVGYGRKPRFHGGMQCKAAANLLDRQFDVTEPDTAWASDFTFIRTHEGWMYLAVVIDLFSRQVVGWAMRDR ADTELVVQAVLSAVWRRKPNAGCLVHSDQGSVYTSDDWRSFLASHGLVCSMSRRGNCHDNAPVESFFGLLKRERIRRLTY PTKDAVIRPGFPRHLKAMENGRFGGVYEQQAVYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orfB | ACX47958.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-30 | 42 |
| VPI2_0008c | ACA01825.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 6e-30 | 42 |
| orfB | AGK06910.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-30 | 42 |
| overlap with orfA characteristic of IS3 family members | AGK06947.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-30 | 42 |
| orfB | AGK06993.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-30 | 42 |
| VC1789 | NP_231424.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 7e-30 | 42 |
| orfB | AGK07051.1 | IS1359 transposase; OrfB | Not tested | SGI1 | Protein | 6e-30 | 42 |
| orfB | YP_001217329.1 | transposase OrfAB subunit B | Not tested | VPI-2 | Protein | 7e-30 | 42 |
| trp1329B | CAB46576.1 | IS1329 transposase B | Not tested | HPI | Protein | 5e-29 | 41 |
| tnpB | CAB61574.1 | transposase B | Not tested | HPI | Protein | 3e-29 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| xccb100_2422 | YP_001903827.1 | ISXac3 transposase | VFG1122 | Protein | 3e-30 | 42 |
