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Name : xccb100_2412 (xccb100_2412) Accession : YP_001903817.1 Strain : Xanthomonas campestris B100 Genome accession: NC_010688 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 2806727 - 2808739 bp Length : 2013 bp Strand : + Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGGCTGTTCTTGTGCGAGAAGCCTTCCCAGGGCAAAGACATTGGCCGGATTCTCGGCGCCACGCAACGCGGTGAAGG CTGCCTCAACGGTTCCGGCGTCACCGTCACCTGGTGCATCGGCCATCTCGTAGAGGCGGCGGCACCCGAAGCCTACGACG AACAGCTAAAGCGCTGGTCCATCGAGCAGTTGCCCATCATTCCCCAGCGTTGGCAGGTCGAGGTCAAACCGAAAACCGCC ACGCAATTCAAGGTCGTCAAGGCGCTACTGGCGAAGGCAACACAGCTTGTCATCGCCACCGATGCCGACCGCGAAGGCGA ACTGATCGCCCGCGAGATCATTGACCTGTGCGGCTACCGCGGCCCCATCGAGCGGCTGTGGTTGTCGGCACTCAACGATG CGTCCATTCGCGCCGCGCTAGGCAAGCTCCGGCCATCGGCCGAGACGCTGCCGATGTACTACTCGGCACTAGCGCGCTCG CGTGCGGACTGGCTTGTGGGCATGAACCTCAGTCGGTTGTTCACGGTGCTGGGTCGGCAAGCCGGCTACGACGGAGTGCT GTCGGTCGGTCGCGTCCAGACCCCGACGCTCAAGCTGGTCGTAGACCGCGACCGCGAGATCGCGGCCTTCGTGTCCGTGC CGTACTGGGCAATCGACGTGTACCTGACCACAAGCGGCCAAGCCTTCACCGCGCAGTGGGTTTCGCCCGACACCTGCACC GACGACTCGGGCCGCTGCCTGCAGCAGCCGGTGGCACAGCAGGCGGCGCAGCAGATCCGCGCCACCGGCAGTGCCCAGGT TGTCTCGGTCGAAACCGAGCGCGTGCGTGAAGGCCCGCCGCTGCCGTTCGACCTGGGCACCTTGCAGGAGTTGTGTTCCA AGCAGCTTGGGCTGGATGTGCAGGAAACCTTGGACATCGCTCAGGCCCTGTACGAAACGCACAAGGCCACGACCTATCCG CGTTCGGATTCCGGCTACCTGCCGGAGAGCATGTTTGCCGAAGTCCCCATAGTCCTCGACAGCCTGCTCAAGACCGATTT CTCGCTGCGCCCGATCATTGACCAACTCGACCGCACACAACGCTCACGCGCTTGGAACGACGCGAAGGTGTCCGCGCACC ACGGCATCATCCCGACGCTCGAACCGGCGAACCTCTCGGCCATGAGCGAGAAGGAACTGGCGGTGTACAAGCTCATCCGG GCGCACTACCTCGCGCAGTTCCTTCCTCACCACGAGTTCGATCGCACAGTGGCGAACCTCTCTTGCGGCCAGCAGACGCT GACGGCCACAGGAAAGCAGGTGGTCGTCAAGGGCTGGCGCCTGGTGTTGGCCGAACCGCAACCCGAGGAGGATAGCGACA CCGCGGCGCGCAGCCAGGTGCTGCCCGCGCTACGCGAGGGCGTGTCATGCCAGGTAGCAGATGTCGATCTGAAGGCGCTC AAGACACAGCCATCTCGACCCTACACGCAGGGCGAATTGGTCAAGTCCATGAAAGGCGTCGCCAAGCTGGTCTCGGATCC GCGCTTGAAACAGAAACTCAAGGATACGGTCGGCATCGGCACCGAAGCGACACGGGCTAACATCATCAGCGGCCTGATCG CACGCGGCTATCTCATGAAGAAGGGGCGCGCGATTCGCGCCTCGGATGCGGCATTCACCCTCATCGACGCCGTGCCCGCA GCGATTGCCGACCCCGGGACCACCGCCGTATGGGAACAAGCGCTAGACATGATCGAAGCGGGACAACTCACGCTGGACGT GTTCATCGGCAAGCAGGCCGCATGGATTTCGCAGTTGATCACGCAGTACGCCAGCGCGTCCCTGTCAATCAAGGTTCCCC ATGGGCCGGCTTGCCCGCAGTGCGGCGCACCCACGCGCCAGCGCAGTGGCAAGAGCGGCCCGTTCTGGTCGTGCAGTCGC TATCCAGACTGCAAAGGCACGCTGCCGGTCGAGTCCGGCACGTCCAAGCGCGTAGCCTCACGCTCGCGCCGTGGCGGCCG AAAAGACTCCTGA Protein sequence : MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAAPEAYDEQLKRWSIEQLPIIPQRWQVEVKPKTA TQFKVVKALLAKATQLVIATDADREGELIAREIIDLCGYRGPIERLWLSALNDASIRAALGKLRPSAETLPMYYSALARS RADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIAAFVSVPYWAIDVYLTTSGQAFTAQWVSPDTCT DDSGRCLQQPVAQQAAQQIRATGSAQVVSVETERVREGPPLPFDLGTLQELCSKQLGLDVQETLDIAQALYETHKATTYP RSDSGYLPESMFAEVPIVLDSLLKTDFSLRPIIDQLDRTQRSRAWNDAKVSAHHGIIPTLEPANLSAMSEKELAVYKLIR AHYLAQFLPHHEFDRTVANLSCGQQTLTATGKQVVVKGWRLVLAEPQPEEDSDTAARSQVLPALREGVSCQVADVDLKAL KTQPSRPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIISGLIARGYLMKKGRAIRASDAAFTLIDAVPA AIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLITQYASASLSIKVPHGPACPQCGAPTRQRSGKSGPFWSCSR YPDCKGTLPVESGTSKRVASRSRRGGRKDS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 89 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 76 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 63 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 5e-167 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 5e-167 | 50 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 4e-167 | 50 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 2e-168 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 4e-167 | 48 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 5e-123 | 42 |
