Gene Information

Name : xccb100_2408 (xccb100_2408)
Accession : YP_001903813.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2803100 - 2804326 bp
Length : 1227 bp
Strand : +
Note : -

DNA sequence :
ATGGCCGTGGATGAAACAGCACCGCGAACACCACGCCAAGGCCCAGTAGCCCTCGCCGATTTGTTCGATAGTGCGCTGAA
AGACCTTGAGCCTAAACCTAGTGTGCCTGCGCCTGCTCCTATCCCTACATGCGGGGACGGTTTCCTTTTCAGCGGTAACC
GGCACGAGAGCGTGCCGCGGCGCCTGTTCCTGGATCGTCGGTTGACGCCACTGGAACGTAATGCCTGGCAAGTCTTCCGG
CTGATGCTCAACAACGACGGCGTGACGGCGTTCCCCACCTATGAGCAATTGCGCCCCTGGCTGGCATCGATGCCCAACGC
AGGAAAGGCTTCGCATGAAACCGTAGCACGTGCCTTGACGCTGTTGCGCCTGACACGCTGGTTGAGCCTCGTGCGCAGGC
GCCGCGATCCCAAGACCGGACGCATCCTCGGCAACCTCTATGTGCTGCACGATGAGCCCTTGACCCCATTCGAGGCTATG
CAGCTTGACACCGACTATCTGGAGCTGGTCAGCCAGTCACTGGGCCATTCTGCGAAGGCCGTGCAGATGGTGGGGCTCAA
CACCCTCAAGGAAATCGAGGAAGACCCGCTGCTGTCCGGCCGCACGTTGCCGTCGCGGTTGCAGGTGCTTGCCGAACGCC
TTGCCCAACAGGGCATCGCTGCCCCCGAGAGTTATCCACAAGAAGACGCCACCCACGATTCCGAAGAAAGGGTTTCGAAC
CTTCTTCGGAATGGCGAACAGCATTCTTCGGAATCCGAAGCAGGGCTGGAACCCACGCCGGACGGTGCTCTTCGGAATCC
GAAGCAGGACCGTACTGTACGTAGTAAAAGTAATAAAGAAATACGTACTACCGCGCGTGAACATGGGCATGTGCGCGCGA
TGCCAGGTGTTCGCATGCCTGATCGCTTCCTGAGCCTGAAGGAAGAGCAGCAGGCCGGCGCACTGGTGGCGTTACAGCAG
GTCGATGCGCCATTGAGGCAAGCCGTACTGGATGAATGGGCGGATCGCTGTCGAGGCTCGACCATTCGCAATCCCGCAGG
GTATTTGTTCGGCATCATCCAGCGCGCTATCCGGGGCGAGTTCAATGCATGGGCCAAGCAAGTCGGGACGGCACCACCGG
TACCTGCTGCGTATGATCGGCCACCGGAAGCACCACGTAACGTGGTTCCGACCGAAGTGGCTCTGCAGCACATCGAACGG
CTGCGCGAGCTTCTGCGTAAGGCCTGA

Protein sequence :
MAVDETAPRTPRQGPVALADLFDSALKDLEPKPSVPAPAPIPTCGDGFLFSGNRHESVPRRLFLDRRLTPLERNAWQVFR
LMLNNDGVTAFPTYEQLRPWLASMPNAGKASHETVARALTLLRLTRWLSLVRRRRDPKTGRILGNLYVLHDEPLTPFEAM
QLDTDYLELVSQSLGHSAKAVQMVGLNTLKEIEEDPLLSGRTLPSRLQVLAERLAQQGIAAPESYPQEDATHDSEERVSN
LLRNGEQHSSESEAGLEPTPDGALRNPKQDRTVRSKSNKEIRTTAREHGHVRAMPGVRMPDRFLSLKEEQQAGALVALQQ
VDAPLRQAVLDEWADRCRGSTIRNPAGYLFGIIQRAIRGEFNAWAKQVGTAPPVPAAYDRPPEAPRNVVPTEVALQHIER
LRELLRKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C105 AAN62198.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 2e-126 79
ORF SG100 AAN62321.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 6e-94 64
pph09 CAI36050.1 hypothetical protein Not tested PPHGI-1 Protein 7e-43 46
RL100 AAP84225.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-44 41