Gene Information

Name : xccb100_2406 (xccb100_2406)
Accession : YP_001903811.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2800877 - 2802520 bp
Length : 1644 bp
Strand : +
Note : -

DNA sequence :
ATGGCTGAGATGACGTCCCAGGACATGGCCGGCAAGCTGCTTGCAGCTGGGTTCGAGCGCAGCGGCCCATCGGCCACGGC
ATTGAGCGACCCAATCGCCGACACCCCGATGGTTGTGACGTTGGACCAGTTGCGGCCTTACGACCACGATCCCCGCAAAA
AGCGCAACTCGGCCTACGATGAAATCAAGGCCTCCATACGAGAGCGCGGCCTGGATGCGGCACCAGCCATCACACGCCGT
CCTGGCGACACGCACTACATCATCCGCAACGGTGGCAATACAAGGCTAGCGATCCTGCGTGAACTCTGGGCAGAGACGAA
GGACGAGAGCTTCTTCCGCATATCGTGCCTGTTCCGGCCCTGGCCTGCGCGCGGAGAAATCGTTGCGCTGACCGGACACC
TCGCCGAGAACGAGCTGCGCGGCGGCCTCACGTTCATCGAGCGCGCCTTGGGCGTCGAAAAAGCCCGCGAGTTCTATGAA
GAGGAAAGCGGCGCCACACTGAGCCAGTCCGAACTGGCCCGCCGCCTGGTCGCCGACGGCTACCCCGTACAGCAGTCGCA
CATCAGCCGCATGGCCGATGCGGTGCGTTACCTGCTGCCCGCGATTCCGACCGTGCTCTATGGCGGTCTGGGCCGCCACC
AGGTCGAGCGACTGTCGGTCATGCGCAAGGCCTGCGAGCGCACCTGGGAGTACTATGCCAAAGGCCGCTCCCTTCAATTG
GACTTCGACAACTTCTTTCAAGAGGTGCTGTCGCAGTTCGACACTCAGGCTGACGAATTCGCACCTCAGCGGGTGCAGGA
CGAGCTGATCGGTCAAATGTCCGAACTGCTGGGCGTCAATTACGACGTGCTGGCCTTGGACCTGACCGAATCCGAGAACC
GCTACCGTGTGCTGGTCAGCGACCCGACTCCGCCGTCGGCTCCACCTGCGTTGCCTGAGCCCGGAGCCATCGCGCGGTCG
CCCGCCGGACCGGCGCCGTCCACCGATACGCCTTCGCCAACTACAGCGCGATCAGCGAGCGGCCCGCTCACGGGCGAGAA
TGATGCTACCGCTGGCAATGCATCCGCAGGAAGCCCTGCGGCAACGGCTGGAGAGCTGCTGCAGGAGCATATCGTCTCGC
CGGCACCGACGACAGAGCGGCTCCAGTCCATCCAGCGGATGATCGCGGACCAGTTGGGTGATGCTCTACCGCCCGACTTC
TCAGCCCGCGTATTGCAGTCGATCCCGGTGCAAGCCGGTGGCCTCTATCCCATCTCCGACGTCTGGTACATCGATCCCGG
CCTGGAAGCGCCCGACCGGCTGCGCATCCATATCGCGCAATTCGCGCGCGAGATCGCCGGCGAGGCGGATTTGGAAGAGT
TCATCGAGGACCGTCCCGACGGCATCGGATTCGCATGTAGCGCCCAGGCCCATTTGCCGCGTGGACACGCCGTGCTGGCG
CTGCTGGGGTCTCTGTCCGGTCAGCAGCCGGCCGATACCAGCCCCTACGGGCAATTCGTCACCGATCTGCCGGCACTGCT
ACACGGTCAAGGCGATGTCACCAAGCGATTGAGCGATACCGCGCTGGTCAAGTTGTTCCGGTTGCTGCGGCTTGCCCGAC
GCCTGCTGGATTTGGAAGCCGGTGCCAGGGCTCCCGATTCTTGA

Protein sequence :
MAEMTSQDMAGKLLAAGFERSGPSATALSDPIADTPMVVTLDQLRPYDHDPRKKRNSAYDEIKASIRERGLDAAPAITRR
PGDTHYIIRNGGNTRLAILRELWAETKDESFFRISCLFRPWPARGEIVALTGHLAENELRGGLTFIERALGVEKAREFYE
EESGATLSQSELARRLVADGYPVQQSHISRMADAVRYLLPAIPTVLYGGLGRHQVERLSVMRKACERTWEYYAKGRSLQL
DFDNFFQEVLSQFDTQADEFAPQRVQDELIGQMSELLGVNYDVLALDLTESENRYRVLVSDPTPPSAPPALPEPGAIARS
PAGPAPSTDTPSPTTARSASGPLTGENDATAGNASAGSPAATAGELLQEHIVSPAPTTERLQSIQRMIADQLGDALPPDF
SARVLQSIPVQAGGLYPISDVWYIDPGLEAPDRLRIHIAQFAREIAGEADLEEFIEDRPDGIGFACSAQAHLPRGHAVLA
LLGSLSGQQPADTSPYGQFVTDLPALLHGQGDVTKRLSDTALVKLFRLLRLARRLLDLEAGARAPDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C107 AAN62200.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 0.0 79
ORF SG102 AAN62323.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 3e-146 62
pph07 CAI36048.1 hypothetical protein Not tested PPHGI-1 Protein 4e-107 47
unnamed ABR13448.1 hypothetical protein Not tested PAGI-5 Protein 3e-92 44
RL102 AAP84227.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-86 42