Gene Information

Name : xccb100_2392 (xccb100_2392)
Accession : YP_001903797.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : IS1404 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 2786298 - 2787065 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence :
ATGATCGGCATGAGCGCCAGTGCACTGCGGTATTGCCCGCGCGAAGATCGCAATGGCGAACTGCGCGAACGCATCTGTGC
GTTGGCGCATCGCCATCGCCGTTATGGCGTGGGGATGATCTATCTCACATTGCGGCAAGAAGGGCGCATCGTGAACTACA
AGCGTGTGGAGCGGTTGTACCGCGAGCAGCAGCTGCAAGTGCGCCGCCGCAAGCGCAAGAAGGTCCCAATAGGCGAGCGT
CAACCGCTGCTGCGGCCATCGCAGGCCAACCAGGTGTGGTCGATGGACTTTGTGTTCGATCGCACCGCCGAAGGCCGGGT
GATCAAGTGTCTGGTGATCGTGGACGATGCAACCCACGAAGCGGTCGCCATCGAGGTGGAGCGCGCGATCTCGGGCCACG
GGGTGACGCGCGTGCTGGACCGACTGGCGCACAGTCGCGGTTTGCCGAAGGTGATCCGCACTGACAACGGCAAGGAGTTT
TGCGGTAAGGCGATGGTCGCCTGGGCGCATGCCCGTAATGTGCAACTACTGCTCATCCAGCCAGGCAAACCGAACCAGAA
CGCCTACGTCGAATCCTTCAACGGCCGACTGCGCGACGAATGCCTCAACGAGCACTGGTTCCCGACGTTACTGCACGCGC
GCACCGAAATCGAACGCTGGCGACGCGAATACCACGAGGACCGACCCAAGAAAGCAATCGGCGGCATGACGCCGGCTGCG
TATGCCCAACATCTGGCAAACACCGATATCATCAACCCCGGACTCTAA

Protein sequence :
MIGMSASALRYCPREDRNGELRERICALAHRHRRYGVGMIYLTLRQEGRIVNYKRVERLYREQQLQVRRRKRKKVPIGER
QPLLRPSQANQVWSMDFVFDRTAEGRVIKCLVIVDDATHEAVAIEVERAISGHGVTRVLDRLAHSRGLPKVIRTDNGKEF
CGKAMVAWAHARNVQLLLIQPGKPNQNAYVESFNGRLRDECLNEHWFPTLLHARTEIERWRREYHEDRPKKAIGGMTPAA
YAQHLANTDIINPGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13352.1 insertion sequence IS407 OrfB Not tested PAGI-5 Protein 5e-49 60
unnamed ABR13540.1 insertion sequence IS407 OrfB Not tested PAGI-8 Protein 5e-57 56
EXB25 ABD94712.1 hypothetical protein Not tested ExoU island B Protein 2e-34 54