Gene Information

Name : xccb100_2386 (xccb100_2386)
Accession : YP_001903791.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Virulence
Product : transcriptional regulator, LuxR family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 2780761 - 2781408 bp
Length : 648 bp
Strand : -
Note : -

DNA sequence :
ATGACAATCAGAGTTTTTCTGATCGACGATCATGCACTCGTGCGTACCGGCATGAAGATGATCCTGTCCAAGGAAGTGGA
CATCGAAGTGGTGGGCGAAGCAGAGAGTGGGGAAGCGGCGCTGCCGCAGATTCGCCAGCTCAAGCCGGGCATCGTGTTAT
GCGATCTGCATCTGCCGGGAGTCAGCGGGCTGGAGATCACTGAGCGCATCGTCAAAGGCGACTACGGCACGCGGGTCATC
ATCGTGTCGGTGCTGGAAGATGGCCCGCTGCCCAAGCGGTTGCTCGAAGCCGGCGCGTCCGGCTATGTCGGCAAGGGCGG
CGACGCGCACGAGTTGCTGCGCGCCGTGCGTGAAGTTGCGCTGGGCCGTCGTTATCTCGGCAACACCATCGCGCAGAACC
TTGCGCTCTCCAACCTGGAAGGTGGCGGTTCGCCCTTCGATGCGCTGTCGCCACGTGAGCTTGAGGTGGCGCTGCTGCTG
ACGCAGGGCCTGCGCCAGGAAGACATCGCCAAGCGCCTGAATCTCAGCGCCAAGACCATCAACACCCACAAGGCGCGCCT
GTTCGAAAAAGTCGGCATCCAGGACAACATCGCCCTGGCGCGCCTGGCCAATCAATACGGCCTGACCGATCCCGCACGTA
CGCTGTGA

Protein sequence :
MTIRVFLIDDHALVRTGMKMILSKEVDIEVVGEAESGEAALPQIRQLKPGIVLCDLHLPGVSGLEITERIVKGDYGTRVI
IVSVLEDGPLPKRLLEAGASGYVGKGGDAHELLRAVREVALGRRYLGNTIAQNLALSNLEGGGSPFDALSPRELEVALLL
TQGLRQEDIAKRLNLSAKTINTHKARLFEKVGIQDNIALARLANQYGLTDPARTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-35 45
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-35 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xccb100_2386 YP_001903791.1 transcriptional regulator, LuxR family VFG1889 Protein 6e-36 43