Gene Information

Name : xccb100_2194 (xccb100_2194)
Accession : YP_001903598.1
Strain : Xanthomonas campestris B100
Genome accession: NC_010688
Putative virulence/resistance : Unknown
Product : IS1477 transposase ORFA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2548159 - 2548425 bp
Length : 267 bp
Strand : +
Note : -

DNA sequence :
ATGAAGAAGAGTCGTTTCAGCACCGAGCAGATCATCGGATTCATCAAGCAGGCGGATGCCGGGATGGCGGTGGCTGAGCT
GTGCCGCCAGCACGGTTTCAGCCCGGCCAGCTTCTACCAGTGGCGGGCCAAGTACGGCGGCATGGAGGCCGAAGACGCGA
AGCGCCTGAAGGAGCTGGAGCAGGAGAACAACCGCCTGAAGCGGTTGCTGGCCGAGGCGCACCTGGACATCGAGGCGCTG
AAGGTCGGGTTCGGGGTAAAACGCTAG

Protein sequence :
MKKSRFSTEQIIGFIKQADAGMAVAELCRQHGFSPASFYQWRAKYGGMEAEDAKRLKELEQENNRLKRLLAEAHLDIEAL
KVGFGVKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 1e-25 73
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 1e-25 73
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 2e-25 73
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-25 73
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 4e-16 52
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 3e-16 52
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 9e-19 51